> Ribosome production factor 2 homolog (S. cerevisiae) (RPF2)
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UGID:199770     UniGene Hs.372265     Homo sapiens (human)   RPF2 Order cDNA clone, Links
Ribosome production factor 2 homolog (S. cerevisiae) (RPF2)

Human protein-coding gene RPF2. Represented by 254 ESTs from 125 cDNA libraries. Corresponds to reference sequence NM_032194.1. [UniGene 199770 - Hs.372265]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001156493.1 PREDICTED: ribosome production factor 2 homolog isoform 2 P. troglodytes 100.0 305
NP_115570.1 RPF2 gene product H. sapiens 100.0 305
XP_001087115.1 PREDICTED: ribosome production factor 2 homolog isoform 1 M. mulatta 99.7 305
XP_003898355.1 PREDICTED: ribosome production factor 2 homolog P. anubis 99.7 305
NP_075812.3 ribosome production factor 2 homolog isoform 1 M. musculus 94.8 305
NP_001080306.1 ribosome production factor 2 homolog X. laevis 85.1 307
NP_999913.1 rpf2 gene product D. rerio 76.8 302
NP_650694.2 CG7993 D. melanogaster 53.0 302
NP_566734.1 ribosome production factor 2-like protein A. thaliana 49.2 268
XP_963740.1 hypothetical protein NCU08595 N. crassa 46.4 179
NP_491117.1 Protein Y54E10A.10 C. elegans 46.3 218
NP_013007.1 Rpf2p S. cerevisiae 46.3 294
Other hits (2 of 50) [Show all]SpeciesId(%)Len(aa)
NP_001039548.1 RPF2 gene product B. taurus 99.0 305
XP_004011249.1 PREDICTED: ribosome production factor 2 homolog O. aries 99.0 305

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; testis; brain; eye; stomach; mixed; placenta; uterus; kidney; embryonic tissue; connective tissue; uncharacterized tissue; liver; prostate; muscle; blood; cervix; skin; bladder; mammary gland; ovary; thyroid; salivary gland; trachea; esophagus; ascites; intestine; lymph node; bone marrow; pancreas; vascular; tonsil
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q21
UniSTS entry: Chr 20 REN58984
UniSTS entry: Chr 20 REN58986
UniSTS entry: Chr 20 REN58985
UniSTS entry: Chr 1 D18S21
UniSTS entry: Chr 1 L17709
UniSTS entry: Chr 1 D22S1584
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

NM_032194.1 Homo sapiens ribosome production factor 2 homolog (S. cerevisiae) (RPF2), mRNA PA
AK056264.1 Homo sapiens cDNA FLJ31702 fis, clone NT2RI2006081
AK292165.1 Homo sapiens cDNA FLJ76924 complete cds, highly similar to Homo sapiens brix domain containing 1 (BXDC1), mRNA P
AL833613.1 Homo sapiens mRNA; cDNA DKFZp686A1873 (from clone DKFZp686A1873) PA
BC035314.1 Homo sapiens brix domain containing 1, mRNA (cDNA clone MGC:21067 IMAGE:4745524), complete cds PA
AK301662.1 Homo sapiens cDNA FLJ57639 complete cds, highly similar to Brix domain-containing protein 1 P
BC005347.1 Homo sapiens cDNA clone IMAGE:3934284, containing frame-shift errors PA
AK024740.1 Homo sapiens cDNA: FLJ21087 fis, clone CAS03323 PA

EST sequences (10 of 254) [Show all sequences]

AA976536.1 Clone IMAGE:1588819 kidney 3' read PA
AA978300.1 Clone IMAGE:1579913 mixed 3' read PA
AA987785.1 Clone IMAGE:1588842 kidney 3' read P
AI082003.1 Clone IMAGE:1638023 mammary gland 3' read PA
BX102294.1 Clone IMAGp998D041904_;_IMAGE:773331 embryonic tissue P
AI266174.1 Clone IMAGE:1938323 embryonic tissue 3' read PA
CB148131.1 Clone L16HLK3-2-D03 liver 5' read P
CB159810.1 Clone L18POOL1n1-19-C04 liver 5' read P
AI239434.1 Clone IMAGE:1846272 mixed 3' read PA
AI245219.1 Clone IMAGE:1868684 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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