> Neutral sphingomyelinase (N-SMase) activation associated factor (NSMAF)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:199636     UniGene Hs.372000     Homo sapiens (human)   NSMAF Order cDNA clone, Links
Neutral sphingomyelinase (N-SMase) activation associated factor (NSMAF)

Human protein-coding gene NSMAF. Represented by 305 ESTs from 165 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 199636 - Hs.372000]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001156836.1 PREDICTED: protein FAN isoform 2 P. troglodytes 100.0 947
NP_001138244.1 NSMAF gene product H. sapiens 100.0 947
XP_001088417.1 PREDICTED: protein FAN isoform 1 M. mulatta 99.9 916
XP_003902833.1 PREDICTED: protein FAN isoform 1 P. anubis 99.8 916
NP_035075.2 protein FAN M. musculus 94.3 919
XP_003199050.1 PREDICTED: protein FAN D. rerio 78.4 910
XP_001696184.1 hypothetical protein CHLREDRAFT_167021 C. reinhardtii 57.5 214
NP_001246613.1 CG43367, isoform E D. melanogaster 54.8 281
XP_965811.2 hypothetical protein NCU00671 N. crassa 52.3 281
NP_192175.3 Beige/BEACH and WD40 domain-containing protein A. thaliana 52.3 375
NP_009961.2 Bph1p S. cerevisiae 50.0 320
NP_497939.2 Protein SEL-2 C. elegans 50.0 276
Other hits (2 of 58) [Show all]SpeciesId(%)Len(aa)
XP_001497104.2 PREDICTED: protein FAN-like E. caballus 96.4 898
XP_002710538.1 PREDICTED: neutral sphingomyelinase (N-SMase) activation associated factor O. cuniculus 96.2 938

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; uncharacterized tissue; uterus; lung; mixed; stomach; embryonic tissue; blood; kidney; muscle; cervix; bladder; testis; pancreas; intestine; eye; skin; adipose tissue; mammary gland; prostate; thyroid; liver; trachea; bone; adrenal gland; connective tissue; nerve; lymph node; bone marrow; heart; mouth; thymus; vascular; ear; pharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8q12-q13
UniSTS entry: Chr 8 SHGC-24319
UniSTS entry: Chr 8 RH11476 [Map Viewer]
UniSTS entry: Chr 8 D8S1515 [Map Viewer]
UniSTS entry: Chr 8 STS-W93092
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_003580.3 Homo sapiens neutral sphingomyelinase (N-SMase) activation associated factor (NSMAF), transcript variant 1, mRNA PA
AK022025.1 Homo sapiens cDNA FLJ11963 fis, clone HEMBB1001051
AK292679.1 Homo sapiens cDNA FLJ77745 complete cds, highly similar to Homo sapiens neutral sphingomyelinase (N-SMase) activation associated factor (NSMAF), mRNA P
AK313991.1 Homo sapiens cDNA, FLJ94643, highly similar to Homo sapiens neutral sphingomyelinase (N-SMase) activation associated factor (NSMAF), mRNA P
AK092144.1 Homo sapiens cDNA FLJ34825 fis, clone NT2NE2008785, weakly similar to ANTER-SPECIFIC PROLINE-RICH PROTEIN APG
AK294009.1 Homo sapiens cDNA FLJ58357 complete cds, highly similar to Protein FAN P
X96586.1 H.sapiens mRNA for FAN protein PA
NM_001144772.1 Homo sapiens neutral sphingomyelinase (N-SMase) activation associated factor (NSMAF), transcript variant 2, mRNA PA
BC041124.1 Homo sapiens neutral sphingomyelinase (N-SMase) activation associated factor, mRNA (cDNA clone MGC:47757 IMAGE:5785460), complete cds PA

EST sequences (10 of 305) [Show all sequences]

AA988590.1 Clone IMAGE:1602100 lung 3' read A
R17211.1 Clone IMAGE:31937 brain 5' read
AI016533.1 Clone IMAGE:1618429 testis 3' read A
AI040628.1 Clone IMAGE:1656829 mixed 3' read A
AA946787.1 Clone IMAGE:1589797 kidney 3' read A
R21323.1 Clone IMAGE:36052 brain 5' read P
AI126081.1 Clone IMAGE:1713434 placenta 3' read A
BX119240.1 Clone IMAGp998C13871_;_IMAGE:376644 heart
AI184367.1 Clone IMAGE:1714374 placenta 3' read A
AI214520.1 Clone IMAGE:1883097 lung 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help