> Zinc finger protein 562 (ZNF562)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:199078     UniGene Hs.371107     Homo sapiens (human)   ZNF562 Order cDNA clone, Links
Zinc finger protein 562 (ZNF562)

Human protein-coding gene ZNF562. Represented by 119 ESTs from 88 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 199078 - Hs.371107]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001123503.1 ZNF562 gene product H. sapiens 100.0 425
XP_003316143.1 PREDICTED: zinc finger protein 562 isoform 1 P. troglodytes 99.8 425
NP_001075954.1 zinc finger protein 426-like M. musculus 56.8 537
NP_001089539.1 zinc finger protein 33A X. laevis 52.7 169
NP_001014498.1 CG1832, isoform B D. melanogaster 48.9 141
XP_003198369.1 PREDICTED: zinc finger protein 180-like D. rerio 48.7 232
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
XP_001098205.1 PREDICTED: zinc finger protein 562 isoform 1 M. mulatta 98.1 425
XP_003914893.1 PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 562 P. anubis 97.7 425

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; lung; thymus; muscle; mammary gland; mixed; uterus; pancreas; eye; stomach; intestine; bone marrow; prostate; skin; liver; esophagus; vascular; kidney; placenta; thyroid; spleen; bone; adrenal gland; testis; embryonic tissue; pharynx; trachea; ganglia; ovary; lymph
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.2
UniSTS entry: Chr 19 RH16536
UniSTS entry: Chr 19 SHGC-54214
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AY346375.1 Homo sapiens hypothetical protein FLJ20079 (FLJ20079) mRNA, complete cds; alternatively spliced P
AK127419.1 Homo sapiens cDNA FLJ45511 fis, clone BRTHA2021212
AK000086.1 Homo sapiens cDNA FLJ20079 fis, clone COL03057 PA
NM_017656.3 Homo sapiens zinc finger protein 562 (ZNF562), transcript variant 3, mRNA P
BC109062.2 Homo sapiens zinc finger protein 562, mRNA (cDNA clone MGC:126160 IMAGE:40033739), complete cds P
NM_001130032.1 Homo sapiens zinc finger protein 562 (ZNF562), transcript variant 2, mRNA P
NM_001130031.1 Homo sapiens zinc finger protein 562 (ZNF562), transcript variant 1, mRNA P
AK300115.1 Homo sapiens cDNA FLJ59420 complete cds, highly similar to Zinc finger protein 562 P
AK297446.1 Homo sapiens cDNA FLJ53361 complete cds, highly similar to Zinc finger protein 562 P
AK304370.1 Homo sapiens cDNA FLJ54578 complete cds, highly similar to Zinc finger protein 562 P
AK303038.1 Homo sapiens cDNA FLJ54726 complete cds, highly similar to Zinc finger protein 562 P

EST sequences (10 of 119) [Show all sequences]

AI001007.1 Clone IMAGE:1609980 mammary gland 3' read A
AA906706.1 Clone IMAGE:1521798 lung 3' read
AI014809.1 Clone IMAGE:1623033 embryonic tissue 3' read A
CB067539.1 Clone IMAGE: pancreas 3' read
CB067837.1 Clone IMAGE: pancreas 5' read
AI168801.1 Clone IMAGE:1661374 mixed 3' read
AI276029.1 Clone IMAGE:1877556 mixed 3' read
AI420747.1 Clone IMAGE:2095078 prostate 3' read
AI458578.1 Clone IMAGE:2149458 lung 3' read
AI570563.1 Clone IMAGE:2164209 brain 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help