> Spermatogenesis associated 5-like 1 (SPATA5L1)
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UGID:198215     UniGene Hs.369657     Homo sapiens (human)   SPATA5L1 Order cDNA clone, Links
Spermatogenesis associated 5-like 1 (SPATA5L1)

Human protein-coding gene SPATA5L1. Represented by 185 ESTs from 116 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 198215 - Hs.369657]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_076968.2 SPATA5L1 gene product H. sapiens 100.0 752
NP_001028428.2 spermatogenesis associated 5-like 1 M. musculus 84.4 745
NP_728878.1 CG12010 D. melanogaster 47.6 227
XP_001691609.1 cdc48-like protein C. reinhardtii 47.5 259
XP_002663242.2 PREDICTED: spermatogenesis-associated protein 5-like, partial D. rerio 47.2 231
NP_178463.1 cell division control protein 48-B A. thaliana 46.9 226
NP_010157.1 AAA family ATPase CDC48 S. cerevisiae 46.6 223
XP_957005.2 cell division cycle protein 48 N. crassa 46.6 223
NP_001095217.1 transitional endoplasmic reticulum ATPase X. laevis 46.6 223
Other hits (2 of 60) [Show all]SpeciesId(%)Len(aa)
XP_001147246.2 PREDICTED: LOW QUALITY PROTEIN: spermatogenesis associated 5-like 1 P. troglodytes 97.5 752
XP_001111759.1 PREDICTED: spermatogenesis-associated protein 5-like protein 1-like isoform 3 M. mulatta 96.5 752

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; testis; liver; thyroid; kidney; embryonic tissue; intestine; eye; pancreas; mouth; lung; cervix; heart; spleen; connective tissue; skin; mixed; placenta; mammary gland; uterus; lymph; prostate; bladder; thymus; ovary; trachea; adrenal gland; bone; lymph node; blood; vascular; ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15q21.1
UniSTS entry: Chr 15 SGC32822 [Map Viewer]
UniSTS entry: Chr 15 STS-D20163 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

BC051861.2 Homo sapiens spermatogenesis associated 5-like 1, mRNA (cDNA clone IMAGE:6501462) PA
BC000981.2 Homo sapiens spermatogenesis associated 5-like 1, mRNA (cDNA clone MGC:5347 IMAGE:2985725), complete cds PA
NM_024063.2 Homo sapiens spermatogenesis associated 5-like 1 (SPATA5L1), transcript variant 1, mRNA PA
AK225463.1 Homo sapiens mRNA for spermatogenesis associated 5-like 1 variant, clone: HSI08785 PA
AK291457.1 Homo sapiens cDNA FLJ78251 complete cds P
AF086107.1 Homo sapiens full length insert cDNA clone YZ95A01 PA
NR_027635.1 Homo sapiens spermatogenesis associated 5-like 1 (SPATA5L1), transcript variant 2, non-coding RNA PA

EST sequences (10 of 185) [Show all sequences]

AA974255.1 Clone IMAGE:1586294 uncharacterized tissue 3' read PA
AA992110.1 Clone IMAGE:1622046 embryonic tissue 3' read PA
AI038662.1 Clone IMAGE:1658721 embryonic tissue 3' read PA
BX114031.1 Clone IMAGp998N211938_;_IMAGE:786644 embryonic tissue P
AI285198.1 Clone IMAGE:1874365 intestine 3' read PA
AI431714.1 Clone IMAGE:2131343 kidney 3' read
AI472535.1 Clone IMAGE:2153146 intestine 3' read A
AI634167.1 Clone IMAGE:2303273 uncharacterized tissue 3' read PA
AI656138.1 Clone IMAGE:2243560 uncharacterized tissue 3' read PA
AI741234.1 Clone IMAGE:2366247 mixed 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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