> Solute carrier family 22 (organic anion transporter), member 6 (SLC22A6)
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UGID:197969     UniGene Hs.369252     Homo sapiens (human)   SLC22A6 Order cDNA clone, Links
Solute carrier family 22 (organic anion transporter), member 6 (SLC22A6)

Human protein-coding gene SLC22A6. Represented by 113 ESTs from 23 cDNA libraries. EST representation biased toward kidney; normal; infant. Corresponds to 4 reference sequences (different isoforms). [UniGene 197969 - Hs.369252]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_004781.2 SLC22A6 gene product H. sapiens 100.0 562
XP_001160211.1 PREDICTED: solute carrier family 22 member 6 isoform 3 P. troglodytes 99.6 562
NP_032792.2 Slc22a6 gene product M. musculus 87.2 544
NP_996960.1 oat gene product D. rerio 55.6 543
NP_001087661.1 solute carrier family 22 member 6-A X. laevis 55.6 534
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
XP_003909714.1 PREDICTED: solute carrier family 22 member 6 isoform 2 P. anubis 97.3 562
XP_001115901.1 PREDICTED: solute carrier family 22 member 6-like isoform 6 M. mulatta 97.3 549

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: kidney [show more like this]
normal [show more like this]
infant [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: kidney; brain; mixed; uncharacterized tissue; eye; muscle
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q12.3
UniSTS entry: Chr 11 RH78059 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

AF057039.2 Homo sapiens putative renal organic anion transporter 1 (hROAT1) mRNA, complete cds P
AF104038.1 Homo sapiens para-aminohippurate transporter mRNA, complete cds P
AB009697.1 Homo sapiens mRNA for hOAT1-1, complete cds P
AB009698.1 Homo sapiens mRNA for hOAT1-2, complete cds P
AF097490.1 Homo sapiens organic anion transporter 1 (OAT1) mRNA, complete cds P
NM_004790.4 Homo sapiens solute carrier family 22 (organic anion transporter), member 6 (SLC22A6), transcript variant 1, mRNA PA
AJ251529.1 Homo sapiens mRNA for putative organic anion transporter (OAT1 gene, splice variant OAT1-3) P
AJ271205.1 Homo sapiens mRNA for putative organic anion transporter (OAT1-4 gene) P
AF124373.1 Homo sapiens organic anion transporter 1 (SLC22A6) mRNA, complete cds PA
AK055764.1 Homo sapiens cDNA FLJ31202 fis, clone KIDNE2003188, highly similar to Homo sapiens solute carrier family 22 (organic anion transporter), member 6 (SLC22A6), transcript variant 5, mRNA P
BC033682.1 Homo sapiens solute carrier family 22 (organic anion transporter), member 6, mRNA (cDNA clone MGC:45260 IMAGE:5190748), complete cds PA
AK091879.1 Homo sapiens cDNA FLJ34560 fis, clone KIDNE2001857, highly similar to Homo sapiens solute carrier family 22, member 6, transcript variant 2, mRNA P
AK298374.1 Homo sapiens cDNA FLJ55736 complete cds, highly similar to Homo sapiens solute carrier family 22, member 6, transcript variant 2, mRNA PA
NM_153278.2 Homo sapiens solute carrier family 22 (organic anion transporter), member 6 (SLC22A6), transcript variant 4, mRNA PA
NM_153277.2 Homo sapiens solute carrier family 22 (organic anion transporter), member 6 (SLC22A6), transcript variant 3, mRNA PA
NM_153276.2 Homo sapiens solute carrier family 22 (organic anion transporter), member 6 (SLC22A6), transcript variant 2, mRNA PA

EST sequences (10 of 113) [Show all sequences]

AI017670.1 Clone IMAGE:1635951 kidney 3' read A
BX103715.1 Clone IMAGp998E08163_;_IMAGE:36482 brain PA
R25797.1 Clone IMAGE:36482 brain 5' read P
CB153468.1 Clone B1T694954-28-G08 brain 5' read P
AI479528.1 Clone IMAGE:2161189 kidney 3' read PA
R46796.1 Clone IMAGE:36482 brain 3' read A
AI671740.1 Clone IMAGE:2297197 kidney 3' read A
AW001738.1 Clone IMAGE:2496198 kidney 3' read A
BX503626.1 Clone DKFZp686G24101 muscle 5' read A
AW242860.1 Clone IMAGE:2691513 kidney 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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