Coiled-coil domain containing 168 (CCDC168)

Restricted Expression:

normal [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

testis; liver; brain

NCBI

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Finding cDNAs

UGID:197496 UniGene Hs.368382 Homo sapiens (human) CCDC168

Links

Coiled-coil domain containing 168 (CCDC168)

Human protein-coding gene CCDC168. Represented by 19 ESTs from 6 cDNA libraries. EST representation biased toward normal. Corresponds to reference sequence NM_001146197.1. [UniGene 197496 - Hs.368382]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_001139669.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	coiled-coil domain-containing protein 168	H. sapiens	100.0	7080
Other hits (2 of 4) [Show all]		Species	Id(%)	Len(aa)
XP_509721.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein LOC452647	P. troglodytes	98.4	7082
XP_003639851.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein LOC100855512	C. lupus familiaris	55.7	5894

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	13
Map position:	13q33.1
UniSTS entry:	Chr 13	SHGC-85214
UniSTS entry:	Chr 13	SHGC-81772

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AK125984.1	Homo sapiens cDNA FLJ43996 fis, clone TESTI4021294	P
AL833908.1	Homo sapiens mRNA; cDNA DKFZp434L2319 (from clone DKFZp434L2319)	PA
AL833499.1	Homo sapiens mRNA; cDNA DKFZp686P1429 (from clone DKFZp686P1429)	P
AK097495.1	Homo sapiens cDNA FLJ40176 fis, clone TESTI2017102	P
NM_001146197.1	Homo sapiens coiled-coil domain containing 168 (CCDC168), mRNA	P

EST sequences (10 of 19) [Show all sequences]

BX113169.1	Clone IMAGp998G031864_;_IMAGE:758042	testis		PA
AI208080.1	Clone IMAGE:1838221	testis	3' read	P
DB032619.1	Clone TESTI2017102	testis	5' read	P
DB074172.1	Clone TESTI4017717	testis	5' read	P
DB076895.1	Clone TESTI4021294	testis	5' read	P
DB098526.1	Clone TESTI4050046	testis	5' read	P
DB340415.1	Clone TESTI4017717	testis	3' read	P
DB340611.1	Clone TESTI4021294	testis	3' read	P
DW409240.1		liver		P
DW412598.1		liver		P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria