> Hyaluronan and proteoglycan link protein 4 (HAPLN4)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:197184     UniGene Hs.367829     Homo sapiens (human)   HAPLN4 Order cDNA clone, Links
Hyaluronan and proteoglycan link protein 4 (HAPLN4)

Human protein-coding gene HAPLN4. Represented by 30 ESTs from 20 cDNA libraries. Corresponds to reference sequence NM_023002.2. [UniGene 197184 - Hs.367829]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_524163.2 PREDICTED: hyaluronan and proteoglycan link protein 4 P. troglodytes 100.0 437
NP_075378.1 HAPLN4 gene product H. sapiens 100.0 401
NP_808568.1 hyaluronan and proteoglycan link protein 4 precursor M. musculus 91.0 399
NP_001038372.1 hapln4 gene product D. rerio 64.2 313
NP_001079631.1 hyaluronan and proteoglycan link protein 3 precursor X. laevis 50.2 321
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_001115139.1 PREDICTED: hyaluronan and proteoglycan link protein 4-like isoform 1 M. mulatta 98.4 436
XP_003915288.1 PREDICTED: hyaluronan and proteoglycan link protein 4 P. anubis 97.5 435

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; eye; uncharacterized tissue; embryonic tissue; heart; mouth; mixed; stomach
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.1
UniSTS entry: Chr 19 WI-16296 [Map Viewer]
UniSTS entry: Chr 19 D19S696E
UniSTS entry: Chr 19 HAPLN4__6695
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AY262756.1 Homo sapiens hyaluronan and proteoglycan link protein 4 (HAPLN4) mRNA, complete cds P
NM_023002.2 Homo sapiens hyaluronan and proteoglycan link protein 4 (HAPLN4), mRNA PA
AB107883.1 Homo sapiens BRAL2 mRNA for brain link protein-2, complete cds P
BC142698.1 Homo sapiens hyaluronan and proteoglycan link protein 4, mRNA (cDNA clone MGC:165025 IMAGE:40148775), complete cds PA
BC142644.1 Homo sapiens hyaluronan and proteoglycan link protein 4, mRNA (cDNA clone MGC:164851 IMAGE:40147937), complete cds PA
AL389941.1 Homo sapiens EST from clone 192488, 5' end

EST sequences (10 of 30) [Show all sequences]

AA984368.1 Clone IMAGE:1629878 brain 3' read
BX096239.1 Clone IMAGp998G20781_;_IMAGE:342187 heart
AI826108.1 Clone IMAGE:2413675 brain 3' read A
Z42718.1 Clone c-0rh07 brain
AW149841.1 Clone IMAGE:2620765 brain 3' read A
AW450803.1 Clone IMAGE:2736401 uncharacterized tissue 3' read A
CK300169.1 Clone UI-E-EJ1-ajx-e-09-0-UI eye 3' read A
CK300901.1 Clone UI-E-EJ1-aka-p-07-0-UI eye 3' read A
AW905097.1 brain
CN425678.1 embryonic tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help