> Peptidase D (PEPD)
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UGID:136426     UniGene Hs.36473     Homo sapiens (human)   PEPD Order cDNA clone, Links
Peptidase D (PEPD)

Human protein-coding gene PEPD. Represented by 922 ESTs from 289 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 136426 - Hs.36473]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_000276.2 PEPD gene product H. sapiens 100.0 492
NP_032846.2 Pepd gene product M. musculus 92.1 492
NP_001079825.1 uncharacterized protein LOC379515 X. laevis 81.6 489
NP_944594.1 pepd gene product D. rerio 80.2 495
NP_194678.2 Xaa-Pro dipeptidase A. thaliana 63.0 485
NP_490843.1 Protein K12C11.1 C. elegans 58.7 477
NP_650192.1 dipeptidase C D. melanogaster 58.0 472
XP_001692401.1 predicted protein C. reinhardtii 58.0 439
Other hits (2 of 54) [Show all]SpeciesId(%)Len(aa)
XP_512574.3 PREDICTED: xaa-Pro dipeptidase-like P. troglodytes 99.3 279
XP_001108725.2 PREDICTED: xaa-Pro dipeptidase M. mulatta 99.1 223

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; kidney; uncharacterized tissue; intestine; placenta; mixed; stomach; liver; connective tissue; mouth; vascular; skin; lung; uterus; heart; thyroid; eye; embryonic tissue; bladder; parathyroid; testis; ovary; mammary gland; pancreas; adipose tissue; blood; adrenal gland; nerve; umbilical cord; esophagus; cervix; trachea; ascites; prostate; pharynx; ganglia; bone; lymph node; spleen; bone marrow; muscle; thymus; tonsil; lymph
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q13.11
UniSTS entry: Chr 19 RH11766
UniSTS entry: GDB:362655
UniSTS entry: Chr 19 D19S1004 [Map Viewer]
UniSTS entry: Chr 19 GDB:362675
UniSTS entry: GDB:362661
UniSTS entry: GDB:362670
UniSTS entry: GDB:362665
UniSTS entry: Chr 19 PEPD__5665
UniSTS entry: Chr 19 SHGC-33750
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

BT006692.1 Homo sapiens peptidase D mRNA, complete cds P
NM_000285.3 Homo sapiens peptidase D (PEPD), transcript variant 1, mRNA PA
CR541669.1 Homo sapiens full open reading frame cDNA clone RZPDo834G1027D for gene PEPD, peptidase D; complete cds, incl. stopcodon P
J04605.1 Human prolidase (imidodipeptidase) mRNA, complete cds P
AK225037.1 Homo sapiens mRNA for Xaa-Pro dipeptidase variant, clone: adKA01621 PA
BC004305.1 Homo sapiens peptidase D, mRNA (cDNA clone MGC:10905 IMAGE:3626134), complete cds PA
BC015027.1 Homo sapiens peptidase D, mRNA (cDNA clone MGC:9000 IMAGE:3920275), complete cds PA
AK057538.1 Homo sapiens cDNA FLJ32976 fis, clone TESTI2014036, highly similar to XAA-PRO DIPEPTIDASE (EC 3.4.13.9) P
AK291561.1 Homo sapiens cDNA FLJ78243 complete cds, highly similar to Homo sapiens peptidase D, mRNA P
AK290781.1 Homo sapiens cDNA FLJ78212 complete cds, highly similar to Human prolidase (imidodipeptidase) mRNA P
AK290756.1 Homo sapiens cDNA FLJ75447 complete cds, highly similar to Homo sapiens peptidase D, mRNA P
BC028295.1 Homo sapiens peptidase D, mRNA (cDNA clone MGC:24893 IMAGE:4470066), complete cds PA
AK294619.1 Homo sapiens cDNA FLJ58179 complete cds, highly similar to Xaa-Pro dipeptidase (EC 3.4.13.9) P
AK293126.1 Homo sapiens cDNA FLJ57945 complete cds, highly similar to Xaa-Pro dipeptidase (EC 3.4.13.9) P
NM_001166057.1 Homo sapiens peptidase D (PEPD), transcript variant 3, mRNA PA
NM_001166056.1 Homo sapiens peptidase D (PEPD), transcript variant 2, mRNA PA

EST sequences (10 of 922) [Show all sequences]

AA906251.1 Clone IMAGE:1505907 mixed 3' read
AA907732.1 Clone IMAGE:1505907 mixed 3' read
AA968732.1 Clone IMAGE:1569940 lung 3' read A
R14806.1 Clone IMAGE:30292 brain 5' read
R15321.1 Clone IMAGE:29687 brain 5' read P
AA993213.1 Clone IMAGE:1625069 embryonic tissue 3' read A
AA996122.1 Clone IMAGE:1603560 lung 3' read
AA910929.1 Clone IMAGE:1520772 kidney 3' read A
AA923708.1 Clone IMAGE:1543380 mixed 3' read A
R20394.1 Clone IMAGE:32665 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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