> T-complex 1 (TCP1)
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UGID:196011     UniGene Hs.363137     Homo sapiens (human)   TCP1 Order cDNA clone, Links
T-complex 1 (TCP1)

Human protein-coding gene TCP1. Represented by 1904 ESTs from 450 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 196011 - Hs.363137]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001098115.1 PREDICTED: t-complex protein 1 subunit alpha isoform 6 M. mulatta 100.0 555
NP_001233501.1 TCP1 gene product P. troglodytes 100.0 555
NP_110379.2 TCP1 gene product H. sapiens 100.0 555
XP_003919470.1 PREDICTED: LOW QUALITY PROTEIN: T-complex protein 1 subunit alpha P. anubis 99.5 603
NP_038714.2 Tcp1 gene product M. musculus 99.1 555
NP_571305.1 tcp1 gene product D. rerio 95.1 553
NP_001080978.1 t-complex 1 X. laevis 94.8 554
NP_524450.2 Tcp1-like, isoform A D. melanogaster 82.5 553
NP_495722.1 Protein CCT-1 C. elegans 75.4 544
XP_001690556.1 T-complex protein 1, alpha subunit C. reinhardtii 74.3 548
NP_188640.1 T-complex protein 1 subunit alpha A. thaliana 73.2 544
XP_955906.2 T-complex protein 1 subunit alpha N. crassa 70.8 564
NP_010498.1 Tcp1p S. cerevisiae 70.1 545
Other hits (2 of 62) [Show all]SpeciesId(%)Len(aa)
XP_541181.1 PREDICTED: T-complex protein 1 subunit alpha isoform 1 C. lupus familiaris 99.5 555
XP_004011485.1 PREDICTED: T-complex protein 1 subunit alpha O. aries 99.5 555

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; uncharacterized tissue; intestine; uterus; placenta; lung; thymus; embryonic tissue; kidney; skin; blood; mammary gland; mixed; liver; prostate; eye; heart; connective tissue; lymph node; lymph; ascites; pancreas; thyroid; stomach; tonsil; spleen; muscle; bone marrow; adrenal gland; ovary; bladder; vascular; ear; larynx; mouth; esophagus; trachea; umbilical cord; pharynx; cervix; bone; pituitary gland; adipose tissue; ganglia; amniotic fluid; nerve; parathyroid; epididymis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q25.3-q26
UniSTS entry: Chr 12 SHGC-36020
UniSTS entry: Chr 6 G06897
UniSTS entry: Chr 6 GDB:451649
UniSTS entry: Chr 6 D6S1840 [Map Viewer]
UniSTS entry: Chr 12 MARC_7185-7186:996687609:1
UniSTS entry: Chr 1 D10S275
UniSTS entry: STS-H53875
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BT006969.1 Homo sapiens t-complex 1 mRNA, complete cds P
AJ609472.1 Homo sapiens ACA29 snoRNA gene
NM_001008897.1 Homo sapiens t-complex 1 (TCP1), transcript variant 2, mRNA PA
X52882.1 Homo sapiens mRNA for t-complex polypeptide 1 (TCP1 gene) P
NR_002965.1 Homo sapiens small nucleolar RNA, H/ACA box 29 (SNORA29), small nucleolar RNA
BC000665.1 Homo sapiens t-complex 1, mRNA (cDNA clone MGC:2234 IMAGE:3349237), complete cds PA
NM_030752.2 Homo sapiens t-complex 1 (TCP1), transcript variant 1, mRNA PA
AK308551.1 Homo sapiens cDNA, FLJ98592
AK312604.1 Homo sapiens cDNA, FLJ92981 P

EST sequences (10 of 1904) [Show all sequences]

AA968691.1 Clone IMAGE:1592289 kidney 3' read A
AA969076.1 Clone IMAGE:1580733 mixed 3' read PA
AA969148.1 Clone IMAGE:1580267 mixed 3' read PA
AA838401.1 Clone IMAGE:1422541 kidney P
AI028475.1 Clone IMAGE:1671532 uncharacterized tissue 3' read PA
AI042361.1 Clone IMAGE:1660886 mixed 3' read PA
AI081947.1 Clone IMAGE:1681786 skin 3' read PA
AI090893.1 Clone IMAGE:1689593 mixed 3' read A
AI128473.1 Clone IMAGE:1711972 uterus 3' read PA
AI144191.1 Clone IMAGE:1707692 heart 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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