> 15 kDa selenoprotein (SEP15)
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UGID:195905     UniGene Hs.362728     Homo sapiens (human)   SEP15 Order cDNA clone, Links
15 kDa selenoprotein (SEP15)

Human protein-coding gene SEP15. Represented by 1063 ESTs from 318 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 195905 - Hs.362728]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001139315.1 SEP15 gene product P. troglodytes 99.4 164
NP_004252.2 SEP15 gene product H. sapiens 99.4 164
XP_003892200.1 PREDICTED: LOW QUALITY PROTEIN: 15 kDa selenoprotein-like P. anubis 99.4 161
NP_001243889.1 15 kDa selenoprotein precursor O. cuniculus 99.4 161
NP_444332.1 Sep15 gene product M. musculus 96.9 161
NP_840079.1 sep15 gene product D. rerio 92.8 151
NP_001165183.1 15 kDa selenoprotein precursor X. laevis 81.0 152
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
NP_001152888.1 SEP15 gene product M. mulatta 98.8 164
NP_001163809.1 SEP15 gene product E. caballus 97.6 164

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; pharynx; lung; pancreas; prostate; connective tissue; intestine; uncharacterized tissue; embryonic tissue; kidney; liver; mixed; skin; bone marrow; placenta; mammary gland; uterus; eye; spleen; bladder; blood; stomach; muscle; pituitary gland; parathyroid; adrenal gland; adipose tissue; thymus; heart; salivary gland; thyroid; ascites; lymph node; lymph; vascular; bone; cervix; ovary; mouth; ear; tonsil
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p31
UniSTS entry: Chr 1 G54028
UniSTS entry: Chr 1 G54091
UniSTS entry: Chr 1 SHGC-75087 [Map Viewer]
UniSTS entry: Chr 1 D1S3349 [Map Viewer]
UniSTS entry: Chr 1 SHGC-32731 [Map Viewer]
UniSTS entry: Chr 1 AL009717
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AF051894.1 Homo sapiens 15 kDa selenoprotein mRNA, complete cds P
NM_004261.3 Homo sapiens 15 kDa selenoprotein (SEP15), transcript variant 1, mRNA PA
NM_203341.1 Homo sapiens 15 kDa selenoprotein (SEP15), transcript variant 2, mRNA PA
AF288991.1 Homo sapiens 15 kDa selenoprotein (SEP15) mRNA, complete cds; alternatively spliced P
AK225640.1 Homo sapiens mRNA for 15 kDa selenoprotein precursor variant, clone: SPL08543 PA
AK225252.1 Homo sapiens mRNA for 15 kDa selenoprotein precursor variant, clone: DMC03465 P
BC005294.1 Homo sapiens 15 kDa selenoprotein, mRNA (cDNA clone MGC:12358 IMAGE:4041321), complete cds PA
BC016359.1 Homo sapiens 15 kDa selenoprotein, mRNA (cDNA clone MGC:24512 IMAGE:4096759), complete cds PA
BC021697.1 Homo sapiens 15 kDa selenoprotein, mRNA (cDNA clone MGC:24367 IMAGE:4051151), complete cds PA
AL833575.1 Homo sapiens mRNA; cDNA DKFZp686D2056 (from clone DKFZp686D2056) PA

EST sequences (10 of 1063) [Show all sequences]

AA983309.1 Clone IMAGE:1590383 kidney 3' read A
AA999842.1 Clone IMAGE:1636349 kidney 3' read A
AI023759.1 Clone IMAGE:1655013 mixed 3' read A
AI027269.1 Clone IMAGE:1644489 testis 3' read A
AI139080.1 Clone IMAGE:1710822 uterus 3' read A
AI140744.1 Clone IMAGE:1683713 parathyroid 3' read
R24125.1 Clone IMAGE:131572 placenta 5' read
CB054008.1 Clone IMAGE:3291442 brain 3' read A
CB054009.1 Clone IMAGE:3291442 brain 5' read P
CB066894.1 Clone IMAGE: pancreas 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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