> Ribosomal protein S3A (RPS3A)
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UGID:195521     UniGene Hs.356572     Homo sapiens (human)   RPS3A Order cDNA clone, Links
Ribosomal protein S3A (RPS3A)

Human protein-coding gene RPS3A. Represented by 7843 ESTs from 674 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 195521 - Hs.356572]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_058655.3 Rps3a1 gene product M. musculus 100.0 263
NP_058849.1 Rps3a gene product R. norvegicus 100.0 263
XP_001366653.1 PREDICTED: 40S ribosomal protein S3a-like M. domestica 100.0 263
XP_001153182.1 PREDICTED: uncharacterized protein LOC461536 isoform 6 P. troglodytes 100.0 263
NP_000997.1 RPS3A gene product H. sapiens 100.0 263
XP_534275.2 PREDICTED: 40S ribosomal protein S3a isoform 1 C. lupus familiaris 100.0 263
XP_001501524.1 PREDICTED: 40S ribosomal protein S3a-like E. caballus 100.0 263
NP_001029210.1 RPS3A gene product B. taurus 100.0 263
XP_004006831.1 PREDICTED: 40S ribosomal protein S3a-like O. aries 100.0 263
XP_002711475.1 PREDICTED: ribosomal protein S3a-like O. cuniculus 100.0 263
NP_001185510.1 RPS3A gene product T. guttata 99.6 263
NP_001008075.1 rps3a gene product X. tropicalis 99.6 263
NP_001075886.1 ribosomal protein S3A G. gallus 99.6 263
XP_003205487.1 PREDICTED: 40S ribosomal protein S3a-like M. gallopavo 99.6 263
XP_001099771.1 PREDICTED: 40S ribosomal protein S3a-like M. mulatta 99.6 263
XP_003903556.1 PREDICTED: 40S ribosomal protein S3a-like P. anubis 99.6 263
NP_001080325.1 40S ribosomal protein S3a-A X. laevis 99.2 263
NP_956353.1 rps3a gene product D. rerio 97.8 266
XP_001693710.1 ribosomal protein S3a, component of cytosolic 80S ribosome and 40S small subunit C. reinhardtii 75.6 258
NP_524618.1 ribosomal protein S3A, isoform A D. melanogaster 75.0 267
NP_195193.1 40S ribosomal protein S3a-2 A. thaliana 74.4 261
NP_497910.1 Protein RPS-1 C. elegans 72.8 256
XP_955974.2 40S ribosomal protein S1 N. crassa 68.0 255
NP_013648.1 ribosomal 40S subunit protein S1B S. cerevisiae 64.7 254
Other hits (2 of 48) [Show all]SpeciesId(%)Len(aa)
XP_003221796.1 PREDICTED: 40S ribosomal protein S3a-like A. carolinensis 99.2 263
NP_001098311.1 fte-1 gene product O. latipes 98.9 265

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; pancreas; brain; uncharacterized tissue; eye; lung; uterus; skin; tonsil; placenta; intestine; lymph; ovary; prostate; muscle; liver; mixed; stomach; mammary gland; bone; connective tissue; kidney; blood; testis; pharynx; ascites; heart; bone marrow; cervix; umbilical cord; lymph node; vascular; thymus; spleen; thyroid; salivary gland; adrenal gland; adipose tissue; mouth; bladder; ear; pituitary gland; nerve; larynx; amniotic fluid; esophagus; parathyroid; trachea; epididymis; spinal cord
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q31.2-q31.3
UniSTS entry: Chr 15 D4S2325
UniSTS entry: Chr 1 GDB:554881
UniSTS entry: Chr 13 MARC_1239-1240:991931119:1
UniSTS entry: Chr 1 D1S3690
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (23)

AK129825.1 Homo sapiens cDNA FLJ26315 fis, clone DMC09112, highly similar to 40S ribosomal protein S3A P
NM_001006.4 Homo sapiens ribosomal protein S3A (RPS3A), transcript variant 1, mRNA PA
BC066926.1 Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:87201 IMAGE:4826149), complete cds PA
BC070211.1 Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:88192 IMAGE:5809691), complete cds PA
BC071916.1 Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:88598 IMAGE:6285242), complete cds PA
M84711.1 Human v-fos transformation effector protein (Fte-1), mRNA complete cds P
M77234.1 Human ribosomal protein S3a mRNA, complete cds P
BC001708.1 Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:1626 IMAGE:3544072), complete cds PA
BC000204.1 Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:3109 IMAGE:3350750), complete cds PA
BC004981.1 Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:3883 IMAGE:2906117), complete cds PA
BC006298.2 Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:13266 IMAGE:4079651), complete cds PA
BC009404.2 Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:15425 IMAGE:4308955), complete cds PA
BC009219.2 Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:16359 IMAGE:3927639), complete cds PA
BC017123.2 Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:18002 IMAGE:3922810), complete cds PA
BC019072.2 Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:29668 IMAGE:5020581), complete cds PA
AK291075.1 Homo sapiens cDNA FLJ78591 complete cds, highly similar to Homo sapiens ribosomal protein S3A (RPS3A), mRNA PA
AK311788.1 Homo sapiens cDNA, FLJ92049, Homo sapiens ribosomal protein S3A (RPS3A), mRNA P
AK308947.1 Homo sapiens cDNA, FLJ98988
BC030161.2 Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:29710 IMAGE:5020904), complete cds PA
BC018954.2 Homo sapiens ribosomal protein S3A, mRNA (cDNA clone IMAGE:4136755) PA
AK296121.1 Homo sapiens cDNA FLJ51870 complete cds, highly similar to 40S ribosomal protein S3a P
NM_001267699.1 Homo sapiens ribosomal protein S3A (RPS3A), transcript variant 2, mRNA
L13802.1 Homo sapiens (clone 03) liver expessed ribosomal protein S3 homologue mRNA, complete cds P

EST sequences (10 of 7843) [Show all sequences]

AA954099.1 Clone IMAGE:1591207 kidney 3' read PA
AA954148.1 Clone IMAGE:1591316 kidney 3' read PA
AA836805.1 Clone IMAGE:1422638 kidney P
AA865502.1 Clone IMAGE:1459278 kidney 3' read A
AA865989.1 Clone IMAGE:1459258 kidney 3' read PA
AA864652.1 Clone IMAGE:1459965 kidney 3' read PA
AA961658.1 Clone IMAGE:1592685 kidney 3' read PA
AA968536.1 Clone IMAGE:1592155 kidney 3' read PA
AA968642.1 Clone IMAGE:1592244 kidney 3' read P
AA968688.1 Clone IMAGE:1592283 kidney 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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