CD27 molecule (CD27)

Restricted Expression:

tonsil [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

tonsil; uncharacterized tissue; mixed; mammary gland; esophagus; thymus; trachea; lymph; lymph node; spleen; heart; brain; intestine; lung; blood; pancreas; kidney; connective tissue

NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:195087 UniGene Hs.355307 Homo sapiens (human) CD27

Order cDNA clone, Links

CD27 molecule (CD27)

Human protein-coding gene CD27. Represented by 77 ESTs from 36 cDNA libraries. EST representation biased toward tonsil. Corresponds to reference sequence NM_001242.4. [UniGene 195087 - Hs.355307]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_508952.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: CD27 antigen	P. troglodytes	100.0	259
NP_001233.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CD27 gene product	H. sapiens	100.0	259
NP_001028298.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Cd27 gene product	M. musculus	72.8	249
Other hits (2 of 9) [Show all]		Species	Id(%)	Len(aa)
XP_001104337.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: CD27 antigen-like isoform 2	M. mulatta	95.4	259
XP_003905898.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: CD27 antigen	P. anubis	94.6	259

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	12
Map position:	12p13
UniSTS entry:	Chr 12	RH17725	[Map Viewer]
UniSTS entry:	Chr 12	WI-7129	[Map Viewer]

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_001242.4	Homo sapiens CD27 molecule (CD27), mRNA	P
M63928.1	Homo sapiens T cell activation antigen (CD27) mRNA, complete cds	P
BC012160.1	Homo sapiens CD27 molecule, mRNA (cDNA clone MGC:20393 IMAGE:4575359), complete cds	PA
AK315732.1	Homo sapiens cDNA, FLJ96839, highly similar to Homo sapiens tumor necrosis factor receptor superfamily, member 7 (TNFRSF7), mRNA	P

EST sequences (10 of 77) [Show all sequences]

AA994925.1	Clone IMAGE:1631500	mammary gland	3' read	A
R25016.1	Clone IMAGE:34637	brain	5' read
BX116628.1	Clone IMAGp998P22158_;_IMAGE:34637	brain		A
AI239571.1	Clone IMAGE:1846337	mixed	3' read	A
R45026.1	Clone IMAGE:34637	brain	3' read	A
AI760377.1	Clone IMAGE:2387740	uncharacterized tissue	3' read	PA
AI770086.1	Clone IMAGE:2399571	kidney	3' read	A
BX385382.2	Clone CS0DL010YJ09	uncharacterized tissue	3' read	P
BX385383.2	Clone CS0DL010YJ09	uncharacterized tissue	5' read	P
AW135784.1	Clone IMAGE:2714203	mixed	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria