> Proteasome (prosome, macropain) subunit, beta type, 1 (PSMB1)
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UGID:194606     UniGene Hs.352768     Homo sapiens (human)   PSMB1 Order cDNA clone, Links
Proteasome (prosome, macropain) subunit, beta type, 1 (PSMB1)

Human protein-coding gene PSMB1. Represented by 1019 ESTs from 341 cDNA libraries. Corresponds to reference sequence NM_002793.3. [UniGene 194606 - Hs.352768]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001140101.1 PREDICTED: proteasome subunit beta type-1 isoform 4 P. troglodytes 100.0 240
NP_002784.1 PSMB1 gene product H. sapiens 100.0 240
XP_001084784.1 PREDICTED: proteasome subunit beta type-1 isoform 2 M. mulatta 99.6 240
XP_003898471.1 PREDICTED: proteasome subunit beta type-1 P. anubis 99.6 240
NP_001231282.1 PSMB1 gene product S. scrofa 99.6 240
NP_035315.1 Psmb1 gene product M. musculus 99.2 239
NP_001003889.1 psmb1 gene product D. rerio 91.1 236
NP_001080435.1 proteasome beta 1 subunit X. laevis 91.1 234
NP_524115.1 proteasome 26kD subunit D. melanogaster 55.4 214
XP_963776.2 proteasome component C5 N. crassa 52.9 262
NP_191641.1 proteasome subunit beta type-1 A. thaliana 50.9 217
NP_009512.1 proteasome core particle subunit beta 6 S. cerevisiae 49.6 225
NP_498806.1 Protein PBS-6 C. elegans 46.2 199
Other hits (2 of 54) [Show all]SpeciesId(%)Len(aa)
XP_532275.2 PREDICTED: proteasome subunit beta type-1 C. lupus familiaris 99.2 240
XP_001499422.1 PREDICTED: proteasome subunit beta type-1-like E. caballus 99.2 240

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; uncharacterized tissue; testis; placenta; mixed; kidney; intestine; embryonic tissue; liver; prostate; blood; uterus; skin; pancreas; ovary; eye; mammary gland; heart; stomach; muscle; lymph; pharynx; pituitary gland; connective tissue; adrenal gland; bone marrow; trachea; salivary gland; umbilical cord; bladder; mouth; ear; cervix; tonsil; ascites; lymph node; thymus; thyroid; vascular; adipose tissue; spleen; bone; esophagus; spinal cord; parathyroid; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q27
UniSTS entry: RH93445
UniSTS entry: Chr 6 RH17360
UniSTS entry: RH47100
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AK125435.1 Homo sapiens cDNA FLJ43446 fis, clone OCBBF2031561, moderately similar to PROTEASOME COMPONENT C5 (EC 3.4.99.46)
NM_002793.3 Homo sapiens proteasome (prosome, macropain) subunit, beta type, 1 (PSMB1), mRNA PA
BT019720.1 Homo sapiens proteasome (prosome, macropain) subunit, beta type, 1 mRNA, complete cds P
AK223193.1 Homo sapiens mRNA for proteasome beta 1 subunit variant, clone: REC00614 PA
BC000508.2 Homo sapiens proteasome (prosome, macropain) subunit, beta type, 1, mRNA (cDNA clone MGC:8505 IMAGE:2822268), complete cds PA
BC020807.1 Homo sapiens proteasome (prosome, macropain) subunit, beta type, 1, mRNA (cDNA clone MGC:23837 IMAGE:4281426), complete cds PA
AB451442.1 Homo sapiens PSMB1 mRNA for proteasome beta 1 subunit, partial cds, clone: FLJ08172AAAF P
AB451312.1 Homo sapiens PSMB1 mRNA for proteasome beta 1 subunit, complete cds, clone: FLJ08172AAAN P
AK058050.1 Homo sapiens cDNA FLJ25321 fis, clone TST00273, highly similar to PROTEASOME COMPONENT C5 (EC 3.4.99.46) P
D00761.1 Homo sapiens mRNA for proteasome subunit C5, complete cds P

EST sequences (10 of 1019) [Show all sequences]

AA973952.1 Clone IMAGE:1586125 uncharacterized tissue 3' read PA
AA974147.1 Clone IMAGE:1585873 uncharacterized tissue 3' read A
AA977350.1 Clone IMAGE:1591899 kidney 3' read PA
AA989474.1 Clone IMAGE:1607771 mammary gland 3' read PA
AA993409.1 Clone IMAGE:1624589 embryonic tissue 3' read PA
AA994411.1 Clone IMAGE:1631892 mammary gland 3' read P
AA995095.1 Clone IMAGE:1635047 kidney 3' read
AI039986.1 Clone IMAGE:1663446 skin 3' read P
AI049520.1 Clone IMAGE:1699309 kidney 3' read PA
AI081944.1 Clone IMAGE:1681780 skin 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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