> TRNA aspartic acid methyltransferase 1 (TRDMT1)
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UGID:194166     UniGene Hs.351665     Homo sapiens (human)   TRDMT1 Order cDNA clone, Links
TRNA aspartic acid methyltransferase 1 (TRDMT1)

Human protein-coding gene TRDMT1. Represented by 87 ESTs from 61 cDNA libraries. Corresponds to reference sequence NM_004412.5. [UniGene 194166 - Hs.351665]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001151840.2 PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase isoform 4 P. troglodytes 100.0 390
NP_004403.1 TRDMT1 gene product H. sapiens 100.0 390
NP_034197.3 Trdmt1 gene product M. musculus 85.5 414
NP_001079673.2 tRNA (cytosine(38)-C(5))-methyltransferase X. laevis 71.7 392
NP_001018153.1 trdmt1 gene product D. rerio 68.2 374
NP_001036355.1 methyltransferase 2, isoform C D. melanogaster 46.7 180
Other hits (2 of 41) [Show all]SpeciesId(%)Len(aa)
XP_003919381.1 PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase P. anubis 98.2 390
XP_001098764.1 PREDICTED: nidogen-2-like M. mulatta 96.5 86

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; embryonic tissue; lung; testis; pancreas; placenta; skin; mammary gland; bone marrow; liver; uterus; larynx; uncharacterized tissue; eye; kidney; muscle; connective tissue; blood; trachea; heart; thymus; bone; prostate; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10p15.1
UniSTS entry: Chr 10 RH70165
UniSTS entry: Chr 10 RH92114
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

BC047733.1 Homo sapiens tRNA aspartic acid methyltransferase 1, mRNA (cDNA clone MGC:54074 IMAGE:6473993), complete cds PA
BX537961.1 Homo sapiens mRNA; cDNA DKFZp686N1286 (from clone DKFZp686N1286); complete cds PA
AK123512.1 Homo sapiens cDNA FLJ41518 fis, clone BRTHA2012183
NM_004412.5 Homo sapiens tRNA aspartic acid methyltransferase 1 (TRDMT1), mRNA P
CR450316.1 Homo sapiens full open reading frame cDNA clone RZPDo834F111D for gene DNMT2, DNA (cytosine-5-)-methyltransferase 2; complete cds; without stopcodon P
AK021659.1 Homo sapiens cDNA FLJ11597 fis, clone HEMBA1003856
AK291417.1 Homo sapiens cDNA FLJ76302 complete cds, highly similar to Homo sapiens DNA (cytosine-5-)-methyltransferase 2 (DNMT2), transcript variant a, mRNA P
AK299027.1 Homo sapiens cDNA FLJ50621 complete cds, highly similar to DNA (cytosine-5)-methyltransferase-like protein 2 P
AF329941.1 Homo sapiens DNA methyltransferase 2c mRNA, partial cds P
AF329940.1 Homo sapiens DNA methyltransferase 2b mRNA, partial cds P
AF329944.1 Homo sapiens DNA methyltransferase 2f mRNA, partial cds
AK303428.1 Homo sapiens cDNA FLJ52038 complete cds, highly similar to DNA (cytosine-5)-methyltransferase-like protein 2 P
AK294100.1 Homo sapiens cDNA FLJ50466 complete cds, highly similar to DNA (cytosine-5)-methyltransferase-like protein 2 P
AF012128.1 Homo sapiens putative DNA methyltransferase (DNMT2) mRNA, complete cds P
AJ223333.1 Homo sapiens mRNA for putative DNA methyltransferase, complete CDS PA
AF045888.1 Homo sapiens putative DNA cytosine methyltransferase DNMT2 (DNMT2) mRNA, complete cds PA

EST sequences (10 of 87) [Show all sequences]

AI005167.1 Clone IMAGE:1626147 mixed 3' read A
AI056280.1 Clone IMAGE:1674185 mixed 3' read PA
BX117729.1 Clone IMAGp998H23381_;_IMAGE:198982 mixed P
AI384115.1 Clone IMAGE:2088816 mixed 3' read A
AI521860.1 Clone IMAGE:2138593 kidney 3' read A
R58162.1 Clone F9381 heart 5' read
BX478185.1 Clone DKFZp686F12203 muscle 5' read
BX494949.1 Clone DKFZp779I1916 liver 5' read
BX509896.1 Clone DKFZp686N1286 muscle 5' read
CD673710.1 Clone fs03d03 eye 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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