> Forkhead box C1 (FOXC1)
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UGID:193592     UniGene Hs.348883     Homo sapiens (human)   FOXC1 Links
Forkhead box C1 (FOXC1)

Human protein-coding gene FOXC1. Represented by 115 ESTs from 64 cDNA libraries. Corresponds to reference sequence NM_001453.2. [UniGene 193592 - Hs.348883]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001444.2 FOXC1 gene product H. sapiens 100.0 552
XP_003311061.2 PREDICTED: forkhead box protein C1 P. troglodytes 99.6 239
NP_032618.2 Foxc1 gene product M. musculus 95.3 552
NP_524202.1 crocodile D. melanogaster 84.6 162
NP_001089846.1 forkhead box protein C1-B X. laevis 80.4 494
NP_571803.1 foxc1a gene product D. rerio 77.7 475
Other hits (2 of 39) [Show all]SpeciesId(%)Len(aa)
XP_001119000.2 PREDICTED: forkhead box protein C1 M. mulatta 99.5 394
XP_003896998.1 PREDICTED: forkhead box protein C1 P. anubis 95.9 484

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; pancreas; ear; placenta; lung; embryonic tissue; eye; connective tissue; mixed; vascular; uncharacterized tissue; bone; kidney; mammary gland; prostate; liver; skin; heart; intestine; brain; esophagus; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p25
UniSTS entry: Chr 6 STS-N25875
UniSTS entry: Chr 6 STS-N22552
UniSTS entry: Chr 6 RH102339
UniSTS entry: Chr 6 RH80486
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

NM_001453.2 Homo sapiens forkhead box C1 (FOXC1), mRNA P
AK021858.1 Homo sapiens cDNA FLJ11796 fis, clone HEMBA1006158, highly similar to Homo sapiens transcription factor forkhead-like 7 (FKHL7) gene A
BC134421.1 Homo sapiens forkhead box C1, mRNA (cDNA clone IMAGE:40121475), complete cds P
L12143.1 Homo sapiens forkhead homolog mRNA, partial cds P
U13221.1 Human forkhead protein FREAC-3 mRNA, partial cds P

EST sequences (10 of 115) [Show all sequences]

AA977661.1 Clone IMAGE:1558348 lung 3' read A
AA885880.1 Clone IMAGE:1500423 lung 3' read A
AA902429.1 Clone IMAGE:1521276 lung 3' read A
AI023501.1 Clone IMAGE:1643502 testis 3' read A
CB046465.1 Clone IMAGE:3252641 kidney 3' read A
AI216334.1 Clone IMAGE:1844148 mixed 3' read A
CB138684.1 Clone L6ChoCK0-28-E05 liver 5' read
AA886687.1 Clone IMAGE:1500703 kidney 3' read A
AI285890.1 Clone IMAGE:1854865 mixed 3' read A
AI333220.1 Clone IMAGE:1931678 mixed 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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