> Family with sequence similarity 189, member B (FAM189B)
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UGID:193347     UniGene Hs.348308     Homo sapiens (human)   FAM189B Order cDNA clone, Links
Family with sequence similarity 189, member B (FAM189B)

Human protein-coding gene FAM189B. Represented by 242 ESTs from 114 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 193347 - Hs.348308]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_006580.2 FAM189B gene product H. sapiens 100.0 667
XP_001155325.1 PREDICTED: protein FAM189B isoform 5 P. troglodytes 99.8 667
XP_003892822.1 PREDICTED: protein FAM189B isoform 1 P. anubis 99.5 666
NP_001014995.1 Fam189b gene product M. musculus 96.3 668
XP_003199016.1 PREDICTED: protein FAM189A1 D. rerio 47.6 208
Other hits (2 of 14) [Show all]SpeciesId(%)Len(aa)
XP_001112812.2 PREDICTED: protein FAM189B-like M. mulatta 99.2 516
XP_001498736.1 PREDICTED: protein FAM189B-like isoform 1 E. caballus 97.5 668

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; testis; uncharacterized tissue; embryonic tissue; eye; uterus; muscle; lymph; skin; prostate; intestine; mammary gland; placenta; cervix; vascular; connective tissue; adrenal gland; ascites; stomach; blood; ovary; heart; liver; lung; pancreas; kidney; nerve; ganglia; umbilical cord; bone; parathyroid; mouth
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q21
UniSTS entry: Chr 1 D1S2518
UniSTS entry: Chr 1 G20617
UniSTS entry: Chr 1 A005Z12 [Map Viewer]
UniSTS entry: Chr 1 D1S2358 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AF070550.1 Homo sapiens clone 24688 cote1 mRNA, partial cds PA
NM_006589.2 Homo sapiens family with sequence similarity 189, member B (FAM189B), transcript variant 1, mRNA PA
NM_198264.1 Homo sapiens family with sequence similarity 189, member B (FAM189B), transcript variant 2, mRNA PA
BC006493.2 Homo sapiens chromosome 1 open reading frame 2, mRNA (cDNA clone MGC:1298 IMAGE:2966515), complete cds PA
BC006297.1 Homo sapiens, Similar to chromosome 1 open reading frame 2, clone IMAGE:4079543, mRNA, partial cds PA
BC007444.2 Homo sapiens chromosome 1 open reading frame 2, mRNA (cDNA clone MGC:4509 IMAGE:2966515), complete cds PA
BC008854.2 Homo sapiens chromosome 1 open reading frame 2, mRNA (cDNA clone IMAGE:4101417), complete cds PA
BC010471.1 Homo sapiens chromosome 1 open reading frame 2, mRNA (cDNA clone MGC:17042 IMAGE:4179576), complete cds PA
BC017262.2 Homo sapiens chromosome 1 open reading frame 2, mRNA (cDNA clone IMAGE:4127147), complete cds PA
BC033707.1 Homo sapiens cDNA clone IMAGE:3891703, containing frame-shift errors PA
NM_001267608.1 Homo sapiens family with sequence similarity 189, member B (FAM189B), transcript variant 3, mRNA PA
BC040136.1 Homo sapiens chromosome 1 open reading frame 2, mRNA (cDNA clone MGC:48819 IMAGE:6061151), complete cds PA

EST sequences (10 of 242) [Show all sequences]

AA864775.1 Clone IMAGE:1456640 kidney 3' read A
AA972442.1 Clone IMAGE:1579378 mixed 3' read A
AI022155.1 Clone IMAGE:1652020 mixed 3' read A
AI028756.1 Clone IMAGE:1645385 testis 3' read A
AI031893.1 Clone IMAGE:1649241 parathyroid 3' read A
AI040468.1 Clone IMAGE:1656269 mixed 3' read A
AI091384.1 Clone IMAGE:1567336 mixed 3' read P
AA887067.1 Clone IMAGE:1476383 uncharacterized tissue 3' read A
BX095192.1 Clone IMAGp998K11123_;_IMAGE:125314 mixed P
AI222824.1 Clone IMAGE:1925414 intestine 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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