> Copine II (CPNE2)
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UGID:192365     UniGene Hs.339809     Homo sapiens (human)   CPNE2 Order cDNA clone, Links
Copine II (CPNE2)

Human protein-coding gene CPNE2. Represented by 246 ESTs from 147 cDNA libraries. Corresponds to reference sequence NM_152727.5. [UniGene 192365 - Hs.339809]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001095990.2 PREDICTED: copine-2-like isoform 3 M. mulatta 100.0 573
NP_689940.3 CPNE2 gene product H. sapiens 100.0 547
XP_003916974.1 PREDICTED: copine-2 isoform 1 P. anubis 100.0 531
XP_510986.2 PREDICTED: copine-2 isoform 9 P. troglodytes 99.8 547
NP_705727.1 Cpne2 gene product M. musculus 97.1 547
NP_001038540.1 copine-2 D. rerio 86.1 553
NP_001088611.1 copine III X. laevis 68.0 528
NP_568180.1 calcium-dependent phospholipid-binding copine-like protein A. thaliana 51.7 232
NP_502225.1 Protein GEM-4 C. elegans 48.4 217
Other hits (2 of 41) [Show all]SpeciesId(%)Len(aa)
XP_004015066.1 PREDICTED: copine-2 O. aries 98.9 445
XP_535289.2 PREDICTED: copine-2 isoform 1 C. lupus familiaris 98.5 547

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; uncharacterized tissue; prostate; embryonic tissue; uterus; pancreas; nerve; blood; intestine; ovary; mouth; thymus; kidney; ear; adrenal gland; bladder; eye; heart; placenta; mixed; larynx; skin; testis; connective tissue; cervix; pharynx; vascular; muscle; liver; lymph node; bone marrow; mammary gland; spleen; bone; thyroid; ganglia; umbilical cord
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16q13
UniSTS entry: Chr 16 CPNE2_4625
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AF492484.1 Homo sapiens copine III-like related protein mRNA, complete cds P
BC053658.1 Homo sapiens copine II, mRNA (cDNA clone MGC:61692 IMAGE:5750192), complete cds PA
AK126138.1 Homo sapiens cDNA FLJ44150 fis, clone THYMU2031046 P
CR749617.1 Homo sapiens mRNA; cDNA DKFZp686E06199 (from clone DKFZp686E06199) PA
AK292269.1 Homo sapiens cDNA FLJ77640 complete cds, highly similar to Homo sapiens copine II (CPNE2), mRNA P
AK315394.1 Homo sapiens cDNA, FLJ96442, highly similar to Homo sapiens copine II (CPNE2), mRNA P
NM_152727.5 Homo sapiens copine II (CPNE2), mRNA PA

EST sequences (10 of 246) [Show all sequences]

R18663.1 Clone IMAGE:30629 brain 5' read
T06096.1 Clone HFBDO39 brain P
AI139657.1 Clone IMAGE:1710957 uterus 3' read A
CB045377.1 Clone IMAGE:3218195 intestine 3' read A
CB050096.1 Clone IMAGE:3271598 prostate 5' read P
CB050095.1 Clone IMAGE:3271598 prostate 3' read A
BX109991.1 Clone IMAGp998K133938_;_IMAGE:1554564 kidney
AI202711.1 Clone IMAGE:1944432 prostate 3' read A
AI309916.1 Clone IMAGE:1913480 intestine 3' read A
AI361159.1 Clone IMAGE:2011105 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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