> Ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen) (FCN3)
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UGID:189808     UniGene Hs.333383     Homo sapiens (human)   FCN3 Order cDNA clone, Links
Ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen) (FCN3)

Human protein-coding gene FCN3. Represented by 98 ESTs from 37 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 189808 - Hs.333383]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_003656.2 FCN3 gene product H. sapiens 100.0 298
NP_001079137.1 ficolin-2 precursor X. laevis 56.5 315
NP_032021.1 Fcna gene product M. musculus 55.0 331
NP_998054.1 mfap4 gene product D. rerio 50.0 210
NP_726164.1 CG30281 D. melanogaster 47.4 190
Other hits (2 of 32) [Show all]SpeciesId(%)Len(aa)
XP_001148844.1 PREDICTED: ficolin-3 P. troglodytes 98.3 287
XP_003891463.1 PREDICTED: ficolin-3 isoform 1 P. anubis 96.7 298

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; mixed; liver; kidney; pancreas; eye; spleen; testis; placenta; blood; intestine; adrenal gland; prostate
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p36.11
UniSTS entry: Chr 1 D1S3293 [Map Viewer]
UniSTS entry: Chr 1 SHGC-74468 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_173452.1 Homo sapiens ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen) (FCN3), transcript variant 2, mRNA PA
AY358283.1 Homo sapiens clone DNA33457 NL3 (UNQ172) mRNA, complete cds P
AY358081.1 Homo sapiens clone DNA22781 NL3 (UNQ172) mRNA, complete cds PA
NM_003665.2 Homo sapiens ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen) (FCN3), transcript variant 1, mRNA PA
CR456808.1 Homo sapiens full open reading frame cDNA clone RZPDo834C1218D for gene FCN3, ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen); complete cds, incl. stopcodon P
BC020731.1 Homo sapiens ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen), mRNA (cDNA clone MGC:22543 IMAGE:4692272), complete cds PA
AK309576.1 Homo sapiens cDNA, FLJ99617
AK309540.1 Homo sapiens cDNA, FLJ99581 P
AK075140.1 Homo sapiens cDNA FLJ90659 fis, clone PLACE1004816, highly similar to Ficolin 3 precursor P

EST sequences (10 of 98) [Show all sequences]

AA961278.1 Clone IMAGE:1564511 mixed 3' read A
R19261.1 Clone IMAGE:129964 mixed 3' read A
CB047196.1 Clone IMAGE:3253232 kidney 3' read PA
CB047197.1 Clone IMAGE:3253232 kidney 5' read P
BX110478.1 Clone IMAGp998M05136_;_IMAGE:129964 mixed P
AI193291.1 Clone IMAGE:1743082 lung 3' read A
AI334591.1 Clone IMAGE:2054861 kidney 3' read PA
AI346745.1 Clone IMAGE:1926667 intestine 3' read PA
AI364974.1 Clone IMAGE:2029499 kidney 3' read PA
AI308143.1 Clone IMAGE:2055349 kidney 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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