> Synaptotagmin XI (SYT11)
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UGID:136145     UniGene Hs.32984     Homo sapiens (human)   SYT11 Order cDNA clone, Links
Synaptotagmin XI (SYT11)

Human protein-coding gene SYT11. Represented by 765 ESTs from 189 cDNA libraries. Corresponds to reference sequence NM_152280.4. [UniGene 136145 - Hs.32984]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003892843.1 PREDICTED: synaptotagmin-11 P. anubis 100.0 430
XP_513867.3 PREDICTED: synaptotagmin-11 P. troglodytes 100.0 430
NP_689493.3 SYT11 gene product H. sapiens 100.0 430
NP_001092641.1 SYT11 gene product B. taurus 99.5 430
NP_061274.2 Syt11 gene product M. musculus 98.6 429
NP_001086243.1 MGC84272 protein X. laevis 87.7 429
NP_998625.2 syt11a gene product D. rerio 73.2 450
NP_477464.1 synaptotagmin 4 D. melanogaster 54.3 310
NP_001022129.1 Protein SNT-1, isoform a C. elegans 45.4 174
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
XP_001928839.3 PREDICTED: synaptotagmin-11-like S. scrofa 99.3 430
XP_001113446.1 PREDICTED: synaptotagmin-11 M. mulatta 99.2 516

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; eye; uncharacterized tissue; uterus; pancreas; kidney; pituitary gland; skin; lung; muscle; mixed; stomach; embryonic tissue; lymph node; bone; lymph; heart; vascular; mouth; nerve; blood; liver; intestine; connective tissue; cervix; prostate; placenta; thymus; trachea; ganglia; mammary gland; esophagus; pharynx; spinal cord; adrenal gland; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q21.2
UniSTS entry: Chr 1 IB1251 [Map Viewer]
UniSTS entry: Chr 1 RH16657 [Map Viewer]
UniSTS entry: Chr 1 RH25308 [Map Viewer]
UniSTS entry: Chr 1 A002N39 [Map Viewer]
UniSTS entry: Chr 1 D1S1849E
UniSTS entry: Chr 1 D7S2133E
UniSTS entry: Chr 1 GDB:335751
UniSTS entry: Chr 1 SHGC-148333
UniSTS entry: Chr 1 D15S1390
UniSTS entry: RH45216
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

CR749792.1 Homo sapiens mRNA; cDNA DKFZp781D015 (from clone DKFZp781D015) P
AK021924.1 Homo sapiens cDNA FLJ11862 fis, clone HEMBA1006900
AK026178.1 Homo sapiens cDNA: FLJ22525 fis, clone HRC12710 A
BC004291.1 Homo sapiens synaptotagmin XI, mRNA (cDNA clone MGC:10881 IMAGE:3621175), complete cds PA
AK027540.1 Homo sapiens cDNA FLJ14634 fis, clone NT2RP2001081, moderately similar to SYNAPTOTAGMIN IV P
BC013690.1 Homo sapiens synaptotagmin XI, mRNA (cDNA clone MGC:17226 IMAGE:4179089), complete cds PA
AK296378.1 Homo sapiens cDNA FLJ50786 complete cds, highly similar to Synaptotagmin-11 P
AK074931.1 Homo sapiens cDNA FLJ90450 fis, clone NT2RP3001388, highly similar to Synaptotagmin XI (SytXI) P
NM_152280.4 Homo sapiens synaptotagmin XI (SYT11), mRNA PA
BC039205.1 Homo sapiens synaptotagmin XI, mRNA (cDNA clone MGC:26698 IMAGE:4819614), complete cds PA

EST sequences (10 of 765) [Show all sequences]

R14168.1 Clone IMAGE:28313 brain 5' read
AA971495.1 Clone IMAGE:1584366 lung 3' read
AA984472.1 Clone IMAGE:1630061 brain 3' read P
R17395.1 Clone IMAGE:31172 brain 5' read
AI003496.1 Clone IMAGE:1699081 kidney 3' read A
AI004590.1 Clone IMAGE:1625273 embryonic tissue 3' read A
AI017272.1 Clone IMAGE:1638555 testis 3' read
R19645.1 Clone IMAGE:34654 brain 5' read
R19948.1 Clone IMAGE:34667 brain 5' read
R20325.1 Clone IMAGE:34291 brain 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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