> Early growth response 1 (EGR1)
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UGID:187679     UniGene Hs.326035     Homo sapiens (human)   EGR1 Order cDNA clone, Links
Early growth response 1 (EGR1)

Human protein-coding gene EGR1. Represented by 326 ESTs from 177 cDNA libraries. Corresponds to reference sequence NM_001964.2. [UniGene 187679 - Hs.326035]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001955.1 EGR1 gene product H. sapiens 100.0 542
XP_003900214.1 PREDICTED: early growth response protein 1 P. anubis 99.8 542
XP_001107731.2 PREDICTED: early growth response protein 1 M. mulatta 99.6 544
XP_517958.3 PREDICTED: early growth response protein 1 P. troglodytes 99.6 516
NP_031939.1 Egr1 gene product M. musculus 95.5 532
NP_001163643.1 stripe, isoform C D. melanogaster 88.0 133
NP_510462.2 Protein EGRH-1 C. elegans 82.4 131
NP_001083862.1 early growth response protein 1-A X. laevis 81.7 496
NP_571323.1 egr1 gene product D. rerio 75.3 510
Other hits (2 of 32) [Show all]SpeciesId(%)Len(aa)
XP_001502603.2 PREDICTED: early growth response protein 1 E. caballus 98.2 541
XP_003124022.1 PREDICTED: early growth response protein 1 S. scrofa 97.4 541

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; intestine; connective tissue; larynx; epididymis; eye; bladder; adrenal gland; vascular; blood; ear; prostate; mouth; liver; thyroid; mixed; mammary gland; amniotic fluid; uncharacterized tissue; brain; kidney; ovary; uterus; pancreas; ascites; bone; skin; adipose tissue; muscle; nerve; ganglia; testis; stomach; pharynx; embryonic tissue; pituitary gland; esophagus; placenta; thymus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5q31.1
UniSTS entry: Chr 5 WI-12096 [Map Viewer]
UniSTS entry: Chr 5 SHGC-11945 [Map Viewer]
UniSTS entry: Chr 5 PMC64850P3
UniSTS entry: Chr 5 D5S2415
UniSTS entry: Chr 5 PMC98754P1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

M62829.1 Human transcription factor ETR103 mRNA, complete cds P
BC041701.1 Homo sapiens early growth response 1, mRNA (cDNA clone IMAGE:5217446), containing frame-shift errors PA
NM_001964.2 Homo sapiens early growth response 1 (EGR1), mRNA P
BC073983.1 Homo sapiens early growth response 1, mRNA (cDNA clone MGC:88036 IMAGE:6188360), complete cds PA
X52541.1 Human mRNA for early growth response protein 1 (hEGR1) P
AK301065.1 Homo sapiens cDNA FLJ60905 complete cds, highly similar to Early growth response protein 1 P
AK298101.1 Homo sapiens cDNA FLJ56577 complete cds, highly similar to Early growth response protein 1 P
M80583.1 Homo sapiens zinc finger protein mRNA P

EST sequences (10 of 326) [Show all sequences]

AA977450.1 Clone IMAGE:1591156 kidney 3' read
AA996194.1 Clone IMAGE:1603843 lung 3' read
AA903814.1 Clone IMAGE:1518009 uncharacterized tissue 3' read A
BX109721.1 Clone IMAGp998F12338_;_IMAGE:182411 mammary gland P
AI272010.1 Clone IMAGE:1866093 kidney 3' read
CB121679.1 Clone B1T694954-11-F12 brain 5' read A
CB136053.1 Clone L14ChoiCK0-3-C11 liver 5' read
CB135496.1 Clone L14ChoiCK0-29-G08 liver 5' read A
AI083849.1 Clone IMAGE:1750731 brain 3' read A
AI284351.1 Clone IMAGE:1864848 kidney 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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