> Autophagy related 9A (ATG9A)
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UGID:187076     UniGene Hs.323363     Homo sapiens (human)   ATG9A Links
Autophagy related 9A (ATG9A)

Human protein-coding gene ATG9A. Represented by 831 ESTs from 230 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 187076 - Hs.323363]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001161185.1 PREDICTED: autophagy-related protein 9A isoform 2 P. troglodytes 100.0 838
NP_001070666.1 ATG9A gene product H. sapiens 100.0 838
XP_001098296.1 PREDICTED: autophagy-related protein 9A isoform 2 M. mulatta 99.9 838
XP_003908027.1 PREDICTED: autophagy-related protein 9A isoform 1 P. anubis 99.9 838
NP_001014240.1 Atg9a gene product R. norvegicus 99.5 838
XP_001493090.1 PREDICTED: autophagy-related protein 9A-like isoform 1 E. caballus 99.5 838
NP_001003917.2 Atg9a gene product M. musculus 99.3 838
NP_001076500.1 atg9a gene product D. rerio 82.5 845
NP_611114.1 Autophagy-specific gene 9, isoform A D. melanogaster 53.4 568
NP_872184.1 Protein ATG-9, isoform b C. elegans 47.9 261
Other hits (2 of 31) [Show all]SpeciesId(%)Len(aa)
NP_001029878.1 ATG9A gene product B. taurus 99.4 838
XP_004004993.1 PREDICTED: autophagy-related protein 9A isoform 1 O. aries 99.4 838

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; uncharacterized tissue; lung; skin; placenta; mixed; thyroid; blood; mouth; kidney; liver; embryonic tissue; intestine; ovary; mammary gland; pituitary gland; cervix; thymus; uterus; stomach; spleen; umbilical cord; amniotic fluid; bladder; prostate; larynx; trachea; eye; nerve; adrenal gland; pancreas; muscle; esophagus; connective tissue; heart; ascites; bone; bone marrow; lymph; salivary gland; vascular
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q35
UniSTS entry: Chr 2 A002Q44
UniSTS entry: Chr 2 RH68357 [Map Viewer]
UniSTS entry: Chr 2 WI-19704 [Map Viewer]
UniSTS entry: Chr 2 MARC_13747-13748:1003852080:1
UniSTS entry: Chr 2 ATG9A
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

BX538198.1 Homo sapiens mRNA; cDNA DKFZp686O20208 (from clone DKFZp686O20208); complete cds PA
BX538192.1 Homo sapiens mRNA; cDNA DKFZp686J01204 (from clone DKFZp686J01204); complete cds PA
BX537984.1 Homo sapiens mRNA; cDNA DKFZp686G18201 (from clone DKFZp686G18201); complete cds PA
AK021732.1 Homo sapiens cDNA FLJ11670 fis, clone HEMBA1004725 P
AK025822.1 Homo sapiens cDNA: FLJ22169 fis, clone HRC00632 PA
BC001206.1 Homo sapiens ATG9 autophagy related 9 homolog A (S. cerevisiae), mRNA (cDNA clone IMAGE:3502018), containing frame-shift errors PA
BC001098.2 Homo sapiens ATG9 autophagy related 9 homolog A (S. cerevisiae), mRNA (cDNA clone IMAGE:3508043), partial cds PA
NM_024085.3 Homo sapiens autophagy related 9A (ATG9A), transcript variant 2, mRNA PA
NM_001077198.1 Homo sapiens autophagy related 9A (ATG9A), transcript variant 1, mRNA PA
AK027448.1 Homo sapiens cDNA FLJ14542 fis, clone NT2RM2001504 P
AK056595.1 Homo sapiens cDNA FLJ32033 fis, clone NTONG2000265, highly similar to Autophagy-related protein 9A P
BC021202.2 Homo sapiens ATG9 autophagy related 9 homolog A (S. cerevisiae), mRNA (cDNA clone IMAGE:4100336), partial cds PA
AK289755.1 Homo sapiens cDNA FLJ77748 complete cds P
AK315553.1 Homo sapiens cDNA, FLJ96623 P
AL833865.1 Homo sapiens mRNA; cDNA DKFZp434P0426 (from clone DKFZp434P0426) P
AK302521.1 Homo sapiens cDNA FLJ55634 complete cds, highly similar to Autophagy-related protein 9A P

EST sequences (10 of 831) [Show all sequences]

AA994395.1 Clone IMAGE:1625914 mixed 3' read A
BX110282.1 Clone IMAGp998H045570_;_IMAGE:2250675 prostate A
CB137995.1 Clone L5HLK1-34-C06 liver 5' read P
CB152719.1 Clone B1T694954-19-H02 brain 5' read P
CB139416.1 Clone L15CKK1-14-C06 liver 5' read P
AI362056.1 Clone IMAGE:2014432 brain 3' read A
AI499464.1 Clone IMAGE:2177344 uterus 3' read A
AI609819.1 Clone IMAGE:2105910 brain 3' read A
AI611402.1 Clone IMAGE:2245858 bone marrow 3' read A
AI698963.1 Clone IMAGE:2323182 pancreas 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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