Coactivator-associated arginine methyltransferase 1 (CARM1)

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UGID:187050 UniGene Hs.323213 Homo sapiens (human) CARM1

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Coactivator-associated arginine methyltransferase 1 (CARM1)

Human protein-coding gene CARM1. Represented by 302 ESTs from 148 cDNA libraries. Corresponds to reference sequence NM_199141.1. [UniGene 187050 - Hs.323213]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_003914955.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: histone-arginine methyltransferase CARM1	P. anubis	100.0	607
NP_954592.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CARM1 gene product	H. sapiens	100.0	607
NP_067506.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Carm1 gene product	M. musculus	99.5	605
NP_001025212.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Carm1 gene product	R. norvegicus	99.5	605
NP_001003645.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	carm1 gene product	D. rerio	92.3	585
NP_001088145.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	histone-arginine methyltransferase CARM1	X. laevis	91.2	600
NP_649963.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	arginine methyltransferase 4, isoform A	D. melanogaster	70.7	444
NP_199713.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	histone-arginine methyltransferase CARM1	A. thaliana	52.8	430
NP_506146.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	GRound-Like (grd related) family member (grl-23)	C. elegans	50.0	168
XP_001695130.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	cell wall protein pherophorin-C10	C. reinhardtii	45.6	226
Other hits (2 of 50) [Show all]		Species	Id(%)	Len(aa)
XP_001916423.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: histone-arginine methyltransferase CARM1	E. caballus	99.5	558
XP_853774.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: histone-arginine methyltransferase CARM1 isoform 2	C. lupus familiaris	99.3	543

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; embryonic tissue; lung; eye; lymph node; lymph; bladder; heart; cervix; parathyroid; ascites; mixed; skin; vascular; connective tissue; placenta; mammary gland; testis; larynx; uterus; uncharacterized tissue; stomach; intestine; kidney; blood; nerve; ovary; bone; pancreas; liver; prostate; salivary gland; bone marrow; thyroid

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	19
Map position:	19p13.2
UniSTS entry:	Chr 19	STS-AA004344

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BC046240.1	Homo sapiens coactivator-associated arginine methyltransferase 1, mRNA (cDNA clone IMAGE:4859203), partial cds	PA
NM_199141.1	Homo sapiens coactivator-associated arginine methyltransferase 1 (CARM1), mRNA	P
BC070496.1	Homo sapiens cDNA clone IMAGE:6094041, partial cds	A
AL833242.1	Homo sapiens mRNA; cDNA DKFZp761A1520 (from clone DKFZp761A1520)	PA
BC036886.1	Homo sapiens coactivator-associated arginine methyltransferase 1, mRNA (cDNA clone IMAGE:5399617), partial cds	PA
AF055027.1	Homo sapiens clone 24658 mRNA sequence	PA

EST sequences (10 of 302) [Show all sequences]

AI014988.1	Clone IMAGE:1640771	testis	3' read	A
AI057337.1	Clone IMAGE:1673059	mixed	3' read	P
AI082440.1	Clone IMAGE:1661960	mixed	3' read	A
AI142932.1	Clone IMAGE:1679512	skin	3' read	A
AI143257.1	Clone IMAGE:1706067	heart	3' read	A
BX098148.1	Clone IMAGp998A21129_;_IMAGE:127004	mixed
AI217951.1	Clone IMAGE:1753634	testis	3' read	A
AI262346.1	Clone IMAGE:1871075	intestine	3' read	A
AI264176.1	Clone IMAGE:1867903	kidney	3' read	PA
CB143599.1	Clone L16HLK3-27-E10	liver	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria