> FAD-dependent oxidoreductase domain containing 1 (FOXRED1)
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UGID:185070     UniGene Hs.317190     Homo sapiens (human)   FOXRED1 Order cDNA clone, Links
FAD-dependent oxidoreductase domain containing 1 (FOXRED1)

Human protein-coding gene FOXRED1. Represented by 524 ESTs from 238 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 185070 - Hs.317190]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_060017.1 FOXRED1 gene product H. sapiens 100.0 485
XP_508852.3 PREDICTED: FAD-dependent oxidoreductase domain-containing protein 1 P. troglodytes 99.5 439
NP_758495.1 Foxred1 gene product M. musculus 83.2 492
NP_001087061.1 FAD-dependent oxidoreductase domain-containing protein 1 X. laevis 69.7 490
NP_001107050.1 foxred1 gene product D. rerio 67.9 470
NP_610228.1 CG3270 D. melanogaster 54.9 411
Other hits (2 of 36) [Show all]SpeciesId(%)Len(aa)
XP_003910978.1 PREDICTED: FAD-dependent oxidoreductase domain-containing protein 1 P. anubis 94.0 552
XP_001112826.2 PREDICTED: FAD-dependent oxidoreductase domain-containing protein 1-like isoform 2 M. mulatta 92.5 453

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; liver; testis; kidney; mouth; thymus; adrenal gland; bone marrow; ovary; bladder; stomach; eye; lung; uterus; blood; mixed; placenta; vascular; intestine; thyroid; pancreas; embryonic tissue; cervix; skin; heart; mammary gland; connective tissue; prostate; lymph; spleen; trachea; umbilical cord; tonsil; ascites; lymph node; muscle; adipose tissue; bone; esophagus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q24.2
UniSTS entry: Chr 11 RH79036
UniSTS entry: Chr 11 RH80716
UniSTS entry: Chr 11 A009D04
UniSTS entry: Chr 11 G32436
UniSTS entry: MARC_7607-7608:996688009:1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

AF447877.1 Homo sapiens FP634 mRNA, complete cds PA
NM_017547.3 Homo sapiens FAD-dependent oxidoreductase domain containing 1 (FOXRED1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA PA
AF103801.1 Homo sapiens clone H17 unknown mRNA PA
AK023987.1 Homo sapiens cDNA FLJ13925 fis, clone Y79AA1000574, highly similar to Homo sapiens clone H17 unknown mRNA P
BC002910.2 Homo sapiens FAD-dependent oxidoreductase domain containing 1, mRNA (cDNA clone IMAGE:3943339), partial cds PA
AL136923.1 Homo sapiens mRNA; cDNA DKFZp586B1920 (from clone DKFZp586B1920) PA
BC013902.2 Homo sapiens FAD-dependent oxidoreductase domain containing 1, mRNA (cDNA clone MGC:15224 IMAGE:3956972), complete cds PA
AK298010.1 Homo sapiens cDNA FLJ55854 complete cds P
AK298807.1 Homo sapiens cDNA FLJ59385 complete cds P
AK295428.1 Homo sapiens cDNA FLJ59527 complete cds P
AK295267.1 Homo sapiens cDNA FLJ53993 complete cds P
AK302039.1 Homo sapiens cDNA FLJ52799 complete cds P
NR_037648.1 Homo sapiens FAD-dependent oxidoreductase domain containing 1 (FOXRED1), transcript variant 2, non-coding RNA PA
NR_037647.1 Homo sapiens FAD-dependent oxidoreductase domain containing 1 (FOXRED1), transcript variant 3, non-coding RNA PA

EST sequences (10 of 524) [Show all sequences]

AA991314.1 Clone IMAGE:1606974 mammary gland 3' read
AA928172.1 Clone IMAGE:1563607 mixed 3' read
AI081150.1 Clone IMAGE:1680309 skin 3' read A
CB053792.1 Clone IMAGE:3290977 uncharacterized tissue 3' read PA
CB053793.1 Clone IMAGE:3290977 uncharacterized tissue 5' read PA
AI147455.1 Clone IMAGE:1693950 heart 3' read P
BX111523.1 Clone IMAGp998C20792_;_IMAGE:346315 heart P
AI215612.1 Clone IMAGE:1845038 mixed 3' read
CB143503.1 Clone L16HLK3-21-A08 liver 5' read P
AI269665.1 Clone IMAGE:1847951 mixed 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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