> Ribosomal protein S27a (RPS27A)
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UGID:183777     UniGene Hs.311640     Homo sapiens (human)   RPS27A Order cDNA clone, Links
Ribosomal protein S27a (RPS27A)

Human protein-coding gene RPS27A. Represented by 1534 ESTs from 401 cDNA libraries. [UniGene 183777 - Hs.311640]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_077239.1 Rps27a gene product M. musculus 100.0 155
NP_112375.1 Rps27a gene product R. norvegicus 100.0 155
XP_001375230.1 PREDICTED: ubiquitin-40S ribosomal protein S27a-like M. domestica 100.0 155
XP_002199635.1 PREDICTED: ubiquitin-40S ribosomal protein S27a T. guttata 100.0 155
NP_001086065.1 ribosomal protein S27a X. laevis 100.0 155
NP_001016172.1 rps27a gene product X. tropicalis 100.0 155
NP_990284.1 RPS27A gene product G. gallus 100.0 155
XP_001112274.1 PREDICTED: hypothetical protein LOC718909 M. mulatta 100.0 155
XP_003908711.1 PREDICTED: ubiquitin-40S ribosomal protein S27a isoform 1 P. anubis 100.0 155
NP_001239528.1 RPS27A gene product P. troglodytes 100.0 155
NP_001129064.1 RPS27A gene product H. sapiens 100.0 155
NP_001239157.1 RPS27A gene product C. lupus familiaris 100.0 155
XP_001496841.1 PREDICTED: ubiquitin-40S ribosomal protein S27a-like E. caballus 100.0 155
XP_003125184.1 PREDICTED: ubiquitin-40S ribosomal protein S27a-like S. scrofa 100.0 155
NP_777203.1 RPS27A gene product B. taurus 100.0 155
XP_004005993.1 PREDICTED: ubiquitin-40S ribosomal protein S27a O. aries 100.0 155
XP_002724420.1 PREDICTED: ubiquitin and ribosomal protein S27a-like O. cuniculus 100.0 155
NP_956796.1 rps27a gene product D. rerio 99.4 155
NP_476778.1 ribosomal protein S27A D. melanogaster 98.1 155
NP_566095.1 ubiquitin-40S ribosomal protein S27a-2 A. thaliana 93.0 156
XP_955944.2 ubiquitin-40S ribosomal protein S31 fusion protein N. crassa 92.8 153
NP_013268.1 ubiquitin-ribosomal 40S subunit protein S31 fusion protein S. cerevisiae 92.0 151
NP_741102.1 Protein UBL-1, isoform a C. elegans 65.4 161
XP_001696195.1 ribosomal protein S27a, component of cytosolic 80S ribosome and 40S small subunit C. reinhardtii 56.3 151
Other hits (2 of 51) [Show all]SpeciesId(%)Len(aa)
XP_003216177.1 PREDICTED: ubiquitin-40S ribosomal protein S27a-like A. carolinensis 99.4 155
XP_003963790.1 PREDICTED: ubiquitin-40S ribosomal protein S27a-like T. rubripes 99.4 155

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; pancreas; embryonic tissue; prostate; mixed; testis; lung; eye; liver; uncharacterized tissue; skin; intestine; ovary; stomach; cervix; muscle; kidney; uterus; vascular; bone; umbilical cord; heart; mouth; placenta; mammary gland; blood; bone marrow; lymph; salivary gland; spleen; thymus; pituitary gland; lymph node; connective tissue; thyroid; adrenal gland; tonsil; ear; ascites; bladder; pharynx; adipose tissue; larynx; trachea; esophagus; parathyroid; epididymis; pineal gland; spinal cord
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 2p16
UniSTS entry: Chr 17 D2S2663
UniSTS entry: Chr 17 PMC280674P2
UniSTS entry: Chr X DXS1154
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

BC053371.1 Homo sapiens ribosomal protein S27a, mRNA (cDNA clone MGC:61435 IMAGE:5531043), complete cds PA
BC001392.2 Homo sapiens ribosomal protein S27a, mRNA (cDNA clone MGC:1629 IMAGE:3050927), complete cds PA
AK225079.1 Homo sapiens mRNA for bA92K2.2 variant, clone: CAS01614 PA
AK315695.1 Homo sapiens cDNA, FLJ96793, Homo sapiens ribosomal protein S27a (RPS27A), mRNA P

EST sequences (10 of 1534) [Show all sequences]

AA954121.1 Clone IMAGE:1591247 kidney 3' read P
AA954843.1 Clone IMAGE:1574339 kidney 3' read PA
AA962042.1 Clone IMAGE:1592320 kidney 3' read PA
AA962113.1 Clone IMAGE:1600286 uncharacterized tissue 3' read PA
AA962784.1 Clone IMAGE:1573451 kidney 3' read PA
AA970585.1 Clone IMAGE:1574845 kidney 3' read PA
AA972522.1 Clone IMAGE:1435478 intestine 3' read PA
AA970733.1 Clone IMAGE:1573112 kidney 3' read PA
AA974514.1 Clone IMAGE:1420979 intestine 3' read PA
AA976810.1 Clone IMAGE:1588298 uncharacterized tissue 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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