> RAB1A, member RAS oncogene family (RAB1A)
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UGID:183505     UniGene Hs.310645     Homo sapiens (human)   RAB1A Order cDNA clone, Links
RAB1A, member RAS oncogene family (RAB1A)

Human protein-coding gene RAB1A. Represented by 1212 ESTs from 415 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 183505 - Hs.310645]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_033022.1 Rab1 gene product M. musculus 100.0 204
NP_112352.2 Rab1a gene product R. norvegicus 100.0 204
NP_001128655.1 RAB1A, member RAS oncogene family T. guttata 100.0 204
NP_001257591.1 ras-related protein Rab-1A G. gallus 100.0 204
XP_001513393.2 PREDICTED: ras-related protein Rab-1A-like O. anatinus 100.0 204
XP_001090072.1 PREDICTED: ras-related protein Rab-1A isoform 4 M. mulatta 100.0 204
XP_003908785.1 PREDICTED: ras-related protein Rab-1A P. anubis 100.0 204
XP_530454.3 PREDICTED: ras-related protein Rab-1A isoform 3 P. troglodytes 100.0 204
NP_004152.1 RAB1A gene product H. sapiens 100.0 204
NP_001003153.1 RAB1A gene product C. lupus familiaris 100.0 204
XP_001493347.1 PREDICTED: ras-related protein Rab-1A-like isoform 1 E. caballus 100.0 204
NP_001026957.1 RAB1A gene product S. scrofa 100.0 204
XP_002709883.1 PREDICTED: RAB1A, member RAS oncogene family isoform 1 O. cuniculus 100.0 204
NP_001080138.1 RAB1A, member RAS oncogene family X. laevis 100.0 203
NP_001004787.1 rab1a gene product X. tropicalis 100.0 203
NP_001155334.1 RAB1A gene product O. aries 100.0 203
XP_003215271.1 PREDICTED: ras-related protein Rab-1A-like A. carolinensis 100.0 202
XP_003456529.1 PREDICTED: ras-related protein Rab-1A-like isoform 1 O. niloticus 99.5 201
NP_001007162.1 rab1a gene product D. rerio 99.5 200
NP_732610.1 Rab1 D. melanogaster 96.1 204
XP_001703135.1 small rab-related GTPase C. reinhardtii 95.1 202
NP_503397.1 Protein RAB-1 C. elegans 94.6 204
XP_963146.2 GTP-binding protein ypt1 N. crassa 94.6 202
NP_193486.1 RAB GTPase homolog 1C A. thaliana 91.5 200
NP_116615.1 Ypt1p S. cerevisiae 85.4 205
Other hits (2 of 53) [Show all]SpeciesId(%)Len(aa)
XP_003972231.1 PREDICTED: ras-related protein Rab-1A-like isoform 1 T. rubripes 99.0 201
XP_004085355.1 PREDICTED: ras-related protein Rab-1A-like isoform 1 O. latipes 99.0 201

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; liver; lung; embryonic tissue; uterus; placenta; skin; eye; uncharacterized tissue; mixed; testis; intestine; pancreas; kidney; adipose tissue; blood; prostate; ovary; mammary gland; bone; vascular; thymus; bone marrow; mouth; parathyroid; trachea; ear; thyroid; ascites; connective tissue; amniotic fluid; muscle; stomach; lymph node; heart; bladder; pituitary gland; nerve; cervix; spleen; adrenal gland; pharynx; lymph; salivary gland; larynx; esophagus; epididymis; umbilical cord
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2p14
UniSTS entry: Chr 2 WI-13176 [Map Viewer]
UniSTS entry: Chr 2 MARC_26152-26153:1030387245:1
UniSTS entry: Chr 2 MARC_33894-33895:1054217168:1
UniSTS entry: Chr 2 RH36094 [Map Viewer]
UniSTS entry: Chr 2 RAB1A_1049
UniSTS entry: Chr 17 RH45304 [Map Viewer]
UniSTS entry: Y00094
UniSTS entry: Chr 14 RH11161
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

AL050268.1 Homo sapiens mRNA; cDNA DKFZp564B163 (from clone DKFZp564B163) A
BX571747.1 Homo sapiens mRNA; cDNA DKFZp686E08159 (from clone DKFZp686E08159) PA
AK123525.1 Homo sapiens cDNA FLJ41531 fis, clone BRTHA2014997
NM_004161.4 Homo sapiens RAB1A, member RAS oncogene family (RAB1A), transcript variant 1, mRNA PA
CR536488.1 Homo sapiens full open reading frame cDNA clone RZPDo834E0917D for gene RAB1A, RAB1A, member RAS oncogene family; complete cds, incl. stopcodon P
CR533479.1 Homo sapiens full open reading frame cDNA clone RZPDo834D0817D for gene RAB1A, RAB1A, member RAS oncogene family; complete cds, incl. stopcodon
BT019529.1 Homo sapiens RAB1A, member RAS oncogene family mRNA, complete cds P
BT019528.1 Homo sapiens RAB1A, member RAS oncogene family mRNA, complete cds P
M28209.1 Homo sapiens GTP-binding protein (RAB1) mRNA, complete cds P
BC000905.2 Homo sapiens RAB1A, member RAS oncogene family, mRNA (cDNA clone MGC:5233 IMAGE:2900705), complete cds PA
AK055927.1 Homo sapiens cDNA FLJ31365 fis, clone NB9N41000135, highly similar to RAS-RELATED PROTEIN RAB-1A P
AK315495.1 Homo sapiens cDNA, FLJ96558, Homo sapiens RAB1A, member RAS oncogene family (RAB1A), mRNA P
AF498929.1 Homo sapiens small GTP binding protein RAB1A (RAB1A) mRNA, complete cds P
NM_015543.1 Homo sapiens RAB1A, member RAS oncogene family (RAB1A), transcript variant 2, mRNA A
AF170935.1 Homo sapiens GTP-binding protein (RAB1A) mRNA, 3' untranslated region
AK303678.1 Homo sapiens cDNA FLJ57768 complete cds, highly similar to Ras-related protein Rab-1A P

EST sequences (10 of 1212) [Show all sequences]

R14095.1 Clone IMAGE:27522 brain 5' read
AA962096.1 Clone IMAGE:1599622 uncharacterized tissue 3' read A
R16060.1 Clone IMAGE:53075 brain 5' read P
AA975948.1 Clone IMAGE:1568054 lung 3' read P
AA983962.1 Clone IMAGE:1601064 uncharacterized tissue 3' read A
AA985172.1 Clone IMAGE:1629295 brain 3' read P
AA908254.1 Clone IMAGE:1522613 lung 3' read A
AA906864.1 Clone IMAGE:1524022 mixed 3' read A
R18396.1 Clone IMAGE:31040 brain 5' read
AI025608.1 Clone IMAGE:1645820 parathyroid 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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