> Ninein (GSK3B interacting protein) (NIN)
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UGID:183415     UniGene Hs.310429     Homo sapiens (human)   NIN Order cDNA clone, Links
Ninein (GSK3B interacting protein) (NIN)

Human protein-coding gene NIN. Represented by 303 ESTs from 162 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 183415 - Hs.310429]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_065972.3 NIN gene product H. sapiens 100.0 2132
XP_003314365.1 PREDICTED: ninein isoform 1 P. troglodytes 99.6 2132
NP_001074922.1 ninein isoform 1 M. musculus 84.3 2112
XP_700610.5 PREDICTED: ninein D. rerio 58.4 616
NP_001086424.1 ninein-like X. laevis 46.5 1536
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
XP_002805084.1 PREDICTED: ninein-like isoform 2 M. mulatta 97.7 2131
XP_003901830.1 PREDICTED: ninein P. anubis 97.5 2132

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; lymph node; placenta; bone marrow; prostate; lung; muscle; vascular; pharynx; embryonic tissue; uncharacterized tissue; mouth; intestine; testis; eye; kidney; lymph; blood; connective tissue; thyroid; bone; adipose tissue; trachea; skin; ovary; amniotic fluid; liver; spinal cord; uterus; mammary gland; heart; pancreas; spleen; ascites; nerve; ganglia; cervix; thymus; stomach
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q22.1
UniSTS entry: Chr 14 SHGC-32079 [Map Viewer]
UniSTS entry: Chr 14 RH104252
UniSTS entry: Chr 14 RH93653
UniSTS entry: Chr 14 RH44954 [Map Viewer]
UniSTS entry: Chr 14 RH65693 [Map Viewer]
UniSTS entry: Chr 14 STS-R14959
UniSTS entry: Chr 14 RH103773
UniSTS entry: Chr 14 NIN_9684
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (24)

NM_182946.1 Homo sapiens ninein (GSK3B interacting protein) (NIN), transcript variant 5, mRNA PA
NM_182944.2 Homo sapiens ninein (GSK3B interacting protein) (NIN), transcript variant 1, mRNA PA
BC065521.1 Homo sapiens ninein (GSK3B interacting protein), mRNA (cDNA clone IMAGE:5787361), partial cds PA
NM_016350.4 Homo sapiens ninein (GSK3B interacting protein) (NIN), transcript variant 6, mRNA PA
AY736183.1 Homo sapiens truncated ninein isoform 1 mRNA, exon and partial cds, alternatively spliced P
AY736182.1 Homo sapiens ninein isoform 6 mRNA, complete cds, alternatively spliced P
AL359571.1 Homo sapiens mRNA; cDNA DKFZp547G043 (from clone DKFZp547G043) A
AF212162.2 Homo sapiens ninein mRNA, complete cds P
BC090932.1 Homo sapiens ninein (GSK3B interacting protein), mRNA (cDNA clone MGC:104964 IMAGE:3090109), complete cds PA
AB046785.2 Homo sapiens mRNA for KIAA1565 protein, partial cds P
AK025652.1 Homo sapiens cDNA: FLJ21999 fis, clone HEP06618, highly similar to AF212162 Homo sapiens ninein mRNA PA
AK026083.1 Homo sapiens cDNA: FLJ22430 fis, clone HRC09093, highly similar to AF212162 Homo sapiens ninein mRNA PA
AK027054.1 Homo sapiens cDNA: FLJ23401 fis, clone HEP18813 PA
AF186776.1 Homo sapiens ninein centrosomal protein mRNA, partial cds P
AF302773.2 Homo sapiens ninein-Lm isoform (ninein) mRNA, complete cds P
AF223939.1 Homo sapiens ninein isotype 3 mRNA, complete cds P
AF223938.1 Homo sapiens ninein isotype 2 mRNA, complete cds P
AF223937.1 Homo sapiens ninein isotype 1 mRNA, complete cds P
AY027796.1 Homo sapiens ninein centrosomal protein isoform C (NIN) mRNA, partial cds P
AY027795.1 Homo sapiens ninein centrosomal protein isoform B (NIN) mRNA, partial cds P
AY027794.1 Homo sapiens ninein centrosomal protein isoform A (NIN) mRNA, partial cds P
NM_020921.3 Homo sapiens ninein (GSK3B interacting protein) (NIN), transcript variant 2, mRNA P
BC141977.1 Homo sapiens cDNA clone IMAGE:40128021
BC034708.2 Homo sapiens ninein (GSK3B interacting protein), mRNA (cDNA clone IMAGE:4745385), partial cds PA

EST sequences (10 of 303) [Show all sequences]

R14959.1 Clone IMAGE:129502 mixed 3' read A
R16456.1 Clone IMAGE:129502 mixed 5' read P
AI001994.1 Clone IMAGE:1619448 testis 3' read A
AA904345.1 Clone IMAGE:1523506 mixed 3' read
AI049765.1 Clone IMAGE:1699825 kidney 3' read A
AI078430.1 Clone IMAGE:1674463 mixed 3' read A
AI078441.1 Clone IMAGE:1674484 mixed 3' read A
BX094808.1 Clone IMAGp998G071722_;_IMAGE:703518 lymph node
BX118845.1 Clone IMAGp998K014107_;_IMAGE:1619448 testis PA
AI202516.1 Clone IMAGE:1943491 prostate 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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