> Jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae) (JHDM1D)
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UGID:183038     UniGene Hs.308710     Homo sapiens (human)   JHDM1D Links
Jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae) (JHDM1D)

Human protein-coding gene JHDM1D. Represented by 218 ESTs from 122 cDNA libraries. Corresponds to reference sequence NM_030647.1. [UniGene 183038 - Hs.308710]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_085150.1 JHDM1D gene product H. sapiens 100.0 940
XP_527907.3 PREDICTED: lysine-specific demethylase 7 P. troglodytes 99.9 940
NP_001028602.2 Jhdm1d gene product M. musculus 94.3 939
NP_001085579.1 jumonji C domain containing histone demethylase 1 homolog D X. laevis 91.3 379
NP_001189348.1 jhdm1db gene product D. rerio 70.0 888
NP_649864.2 lysine (K)-specific demethylase 2, isoform B D. melanogaster 47.6 288
NP_498419.2 Protein JHDM-1, isoform b C. elegans 46.5 157
Other hits (2 of 38) [Show all]SpeciesId(%)Len(aa)
XP_001109325.1 PREDICTED: histone lysine demethylase JHDM1D-like M. mulatta 98.6 940
XP_003896726.1 PREDICTED: lysine-specific demethylase 7 P. anubis 98.4 940

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; brain; liver; intestine; embryonic tissue; uncharacterized tissue; larynx; esophagus; uterus; lymph node; blood; eye; bone marrow; mammary gland; testis; connective tissue; muscle; placenta; spleen; bladder; trachea; pancreas; thymus; kidney; lung; stomach; ear; skin; lymph; ascites; heart; bone; parathyroid; thyroid; adipose tissue; nerve; adrenal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7q34
UniSTS entry: Chr 7 RH18256
UniSTS entry: Chr 7 SHGC-34239 [Map Viewer]
UniSTS entry: Chr 7 STS-R69609
UniSTS entry: Chr 7 GDB:1318569
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BX649115.1 Homo sapiens mRNA; cDNA DKFZp686M12109 (from clone DKFZp686M12109) PA
BX641017.1 Homo sapiens mRNA; cDNA DKFZp686I05109 (from clone DKFZp686I05109) PA
AK131497.1 Homo sapiens cDNA FLJ16696 fis, clone TRACH3003832, weakly similar to Mus musculus PHD finger protein 2 (Phf2) P
NM_030647.1 Homo sapiens jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae) (JHDM1D), mRNA P
AB051505.1 Homo sapiens mRNA for KIAA1718 protein, partial cds P
BC127007.1 Homo sapiens jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae), mRNA (cDNA clone IMAGE:40108457), complete cds P
BC127006.1 Homo sapiens cDNA clone IMAGE:40108449 P
AK057208.1 Homo sapiens cDNA FLJ32646 fis, clone SYNOV2001262

EST sequences (10 of 218) [Show all sequences]

R16961.1 Clone IMAGE:129735 mixed 5' read
AI032887.1 Clone IMAGE:1646747 parathyroid 3' read A
AI079486.1 Clone IMAGE:1677749 mixed 3' read A
AI082757.1 Clone IMAGE:1652897 mixed 3' read A
AI092964.1 Clone IMAGE:1693169 heart 3' read A
AI138940.1 Clone IMAGE:1735660 testis 3' read A
BX110196.1 Clone IMAGp998E23314_;_IMAGE:173182 brain
AI270190.1 Clone IMAGE:1962738 intestine 3' read
AI271440.1 Clone IMAGE:1856942 mixed 3' read A
AI333315.1 Clone IMAGE:1931594 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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