> RAB3 GTPase activating protein subunit 1 (catalytic) (RAB3GAP1)
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UGID:182317     UniGene Hs.306327     Homo sapiens (human)   RAB3GAP1 Links
RAB3 GTPase activating protein subunit 1 (catalytic) (RAB3GAP1)

Human protein-coding gene RAB3GAP1. Represented by 440 ESTs from 198 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 182317 - Hs.306327]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001153005.1 PREDICTED: rab3 GTPase-activating protein catalytic subunit isoform 2 P. troglodytes 100.0 987
NP_001165906.1 RAB3GAP1 gene product H. sapiens 100.0 987
NP_848805.2 Rab3gap1 gene product M. musculus 95.7 980
NP_001087691.1 rab3 GTPase-activating protein catalytic subunit X. laevis 86.8 977
NP_001071256.2 rab3gap1 gene product D. rerio 80.8 968
NP_608608.2 CG31935 D. melanogaster 51.6 217
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
XP_003909229.1 PREDICTED: rab3 GTPase-activating protein catalytic subunit isoform 2 P. anubis 99.4 988
XP_001096972.2 PREDICTED: rab3 GTPase-activating protein catalytic subunit-like M. mulatta 99.0 997

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; uterus; pancreas; placenta; prostate; muscle; stomach; adrenal gland; blood; trachea; eye; embryonic tissue; mixed; lung; uncharacterized tissue; lymph node; mouth; ovary; pituitary gland; mammary gland; connective tissue; amniotic fluid; kidney; lymph; skin; intestine; pharynx; thymus; liver; vascular; larynx; cervix; ascites; heart; salivary gland; bone marrow; parathyroid; bone; ear; ganglia; thyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q21.3
UniSTS entry: Chr 2 D2S2871 [Map Viewer]
UniSTS entry: Chr 2 SHGC-31260 [Map Viewer]
UniSTS entry: Chr 2 RH67847
UniSTS entry: Chr 2 RH25298
UniSTS entry: Chr 2 A008U03
UniSTS entry: Chr 2 WI-17012 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

BC071602.1 Homo sapiens cDNA clone IMAGE:5276867, containing frame-shift errors PA
NM_012233.2 Homo sapiens RAB3 GTPase activating protein subunit 1 (catalytic) (RAB3GAP1), transcript variant 2, mRNA PA
AK022494.1 Homo sapiens cDNA FLJ12432 fis, clone NT2RM1000018, highly similar to Human mRNA for KIAA0066 gene P
AK309118.1 Homo sapiens cDNA, FLJ99159 P
BC022977.1 Homo sapiens RAB3 GTPase activating protein subunit 1 (catalytic), mRNA (cDNA clone IMAGE:4997762), partial cds PA
BC030992.2 Homo sapiens cDNA clone IMAGE:4273559, partial cds A
BC020303.1 Homo sapiens RAB3 GTPase activating protein subunit 1 (catalytic), mRNA (cDNA clone IMAGE:4424947) A
AB449877.1 Homo sapiens RAB3GAP1 mRNA for RAB3 GTPase activating protein subunit 1, complete cds P
NM_001172435.1 Homo sapiens RAB3 GTPase activating protein subunit 1 (catalytic) (RAB3GAP1), transcript variant 1, mRNA PA
D31886.1 Homo sapiens KIAA0066 mRNA, partial cds P
BC036732.1 Homo sapiens RAB3 GTPase activating protein subunit 1 (catalytic), mRNA (cDNA clone IMAGE:5417451) PA

EST sequences (10 of 440) [Show all sequences]

AA970779.1 Clone IMAGE:1560830 mixed 3' read A
AA994192.1 Clone IMAGE:1621273 testis 3' read
AA995313.1 Clone IMAGE:1606595 kidney 3' read P
AI038611.1 Clone IMAGE:1658676 embryonic tissue 3' read
AI040009.1 Clone IMAGE:1664294 skin 3' read
AI041508.1 Clone IMAGE:1648859 parathyroid 3' read A
AA947784.1 Clone IMAGE:1586958 uncharacterized tissue 3' read
AI057532.1 Clone IMAGE:1667363 parathyroid 3' read A
AI091345.1 Clone IMAGE:1566942 mixed 3' read
AI129854.1 Clone IMAGE:1711567 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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