> OTU domain containing 6B (OTUD6B)
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UGID:135795     UniGene Hs.30532     Homo sapiens (human)   OTUD6B Order cDNA clone, Links
OTU domain containing 6B (OTUD6B)

Human protein-coding gene OTUD6B. Represented by 130 ESTs from 84 cDNA libraries. Corresponds to reference sequence NM_016023.3. [UniGene 135795 - Hs.30532]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_057107.3 OTUD6B gene product H. sapiens 100.0 322
XP_003311873.1 PREDICTED: OTU domain-containing protein 6B P. troglodytes 99.7 322
NP_690025.2 Otud6b gene product M. musculus 91.4 324
NP_001086171.1 OTU domain-containing protein 6B X. laevis 75.3 291
NP_956519.1 otud6b gene product D. rerio 68.9 283
Other hits (2 of 30) [Show all]SpeciesId(%)Len(aa)
XP_001086186.2 PREDICTED: OTU domain-containing protein 6B-like M. mulatta 98.2 323
XP_003903005.1 PREDICTED: OTU domain-containing protein 6B P. anubis 98.2 323

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; muscle; embryonic tissue; pharynx; placenta; mixed; skin; liver; bone marrow; bladder; eye; kidney; blood; umbilical cord; vascular; testis; pancreas; esophagus; lymph; trachea; uterus; lymph node; lung; prostate; mammary gland; intestine; salivary gland; connective tissue; stomach; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8q21.3
UniSTS entry: Chr 8 SHGC-35860 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BX647772.1 Homo sapiens mRNA; cDNA DKFZp686N2259 (from clone DKFZp686N2259) PA
AL137441.1 Homo sapiens mRNA; cDNA DKFZp761P2124 (from clone DKFZp761P2124) PA
NM_016023.3 Homo sapiens OTU domain containing 6B (OTUD6B), mRNA PA
AF151836.1 Homo sapiens CGI-77 protein mRNA, complete cds P
AK291646.1 Homo sapiens cDNA FLJ75719 complete cds, highly similar to Homo sapiens OTU domain containing 6B (OTUD6B), mRNA P
AK310823.1 Homo sapiens cDNA, FLJ17865 P
BC029760.1 Homo sapiens OTU domain containing 6B, mRNA (cDNA clone MGC:16950 IMAGE:4343258), complete cds PA
AK293843.1 Homo sapiens cDNA FLJ60450 complete cds, highly similar to OTU domain-containing protein 6B P

EST sequences (10 of 130) [Show all sequences]

CB120152.1 Clone L8SCK0-26-E04 liver 5' read
AA724552.1 Clone IMAGE:1326533 mixed 3' read A
AI363745.1 Clone IMAGE:1987706 uterus 3' read A
CB961349.1 Clone IMAGE:30337784 placenta 5' read P
BX416180.2 Clone CS0DA002YN08 uncharacterized tissue 5' read
AI990373.1 Clone IMAGE:2497766 uncharacterized tissue 3' read A
AW029094.1 Clone IMAGE:2542760 stomach 3' read A
BX507040.1 Clone DKFZp779C203 liver 5' read P
CD688044.1 pharynx P
CF122248.1 Clone IMAGE:30571940 prostate 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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