> Tubulin, beta 1 class VI (TUBB1)
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UGID:181585     UniGene Hs.303023     Homo sapiens (human)   TUBB1 Order cDNA clone, Links
Tubulin, beta 1 class VI (TUBB1)

Human protein-coding gene TUBB1. Represented by 54 ESTs from 19 cDNA libraries. EST representation biased toward fetus. Corresponds to reference sequence NM_030773.3. [UniGene 181585 - Hs.303023]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_110400.1 TUBB1 gene product H. sapiens 100.0 450
XP_001140173.1 PREDICTED: tubulin beta-1 chain P. troglodytes 99.8 450
NP_001074440.1 Tubb1 gene product M. musculus 93.8 450
NP_001079876.1 uncharacterized protein LOC379566 X. laevis 82.9 444
NP_523795.2 beta-Tubulin at 56D, isoform B D. melanogaster 82.7 446
NP_942104.2 tubb4b gene product D. rerio 82.4 443
NP_509585.1 Protein TBB-4 C. elegans 82.2 443
XP_001693997.1 beta tubulin 2 C. reinhardtii 76.4 441
NP_568959.1 tubulin beta-2/beta-3 chain A. thaliana 75.1 449
XP_957669.2 tubulin beta chain N. crassa 74.7 446
NP_116616.1 Tub2p S. cerevisiae 71.2 441
Other hits (2 of 67) [Show all]SpeciesId(%)Len(aa)
XP_001082345.1 PREDICTED: tubulin beta-1 chain-like M. mulatta 99.1 450
XP_003904598.1 PREDICTED: tubulin beta-1 chain P. anubis 99.1 450

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: fetus [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; uncharacterized tissue; embryonic tissue; spleen; blood; bone marrow; lung; ear; pancreas; testis; placenta
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
Map position: 20q13.32
UniSTS entry: Chr 20 SGC33843 [Map Viewer]
UniSTS entry: Chr 20 STS-T99531 [Map Viewer]
UniSTS entry: Chr 20 RH17503 [Map Viewer]
UniSTS entry: Chr 20 SHGC-33555 [Map Viewer]
UniSTS entry: Chr 20 STS-H96735 [Map Viewer]
UniSTS entry: Chr 6 MARC_24019-24020:1029775248:1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

AJ292757.1 Homo sapiens TUBB1 gene for human beta tubulin 1, class VI P
NM_030773.3 Homo sapiens tubulin, beta 1 class VI (TUBB1), mRNA P
BC033679.1 Homo sapiens tubulin, beta 1, mRNA (cDNA clone MGC:44928 IMAGE:5180793), complete cds PA

EST sequences (10 of 54) [Show all sequences]

AI051426.1 Clone IMAGE:1659036 embryonic tissue 3' read A
BX114569.1 Clone IMAGp998L23656_;_IMAGE:294310 mixed
AI292170.1 Clone IMAGE:1894839 placenta 3' read A
CD632718.1 uncharacterized tissue P
CD632711.1 uncharacterized tissue P
CD632712.1 uncharacterized tissue P
CD632713.1 uncharacterized tissue P
CD632714.1 uncharacterized tissue P
CD632715.1 uncharacterized tissue
CD632716.1 uncharacterized tissue P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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