> Transient receptor potential cation channel, subfamily V, member 6 (TRPV6)
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UGID:181522     UniGene Hs.302740     Homo sapiens (human)   TRPV6 Links
Transient receptor potential cation channel, subfamily V, member 6 (TRPV6)

Human protein-coding gene TRPV6. Represented by 106 ESTs from 50 cDNA libraries. EST representation biased toward adult. Corresponds to reference sequence NM_018646.3. [UniGene 181522 - Hs.302740]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_061116.2 TRPV6 gene product H. sapiens 100.0 724
XP_001161776.1 PREDICTED: transient receptor potential cation channel subfamily V member 6 isoform 7 P. troglodytes 99.7 724
NP_071858.2 Trpv6 gene product M. musculus 91.8 726
NP_001082336.1 calcium transporter 1 X. laevis 61.3 653
NP_001001849.1 trpv6 gene product D. rerio 54.6 646
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_003896797.1 PREDICTED: transient receptor potential cation channel subfamily V member 6 P. anubis 99.2 726
XP_001091685.2 PREDICTED: transient receptor potential cation channel subfamily V member 6 M. mulatta 98.3 756

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; uncharacterized tissue; prostate; mixed; eye; brain; mammary gland; cervix; intestine; testis; blood; trachea; epididymis; bladder; lung; pancreas
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7q34
UniSTS entry: Chr 7 RH71266
UniSTS entry: Chr 7 SHGC-52550 [Map Viewer]
UniSTS entry: Chr 7 G31055
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (17)

AY203947.1 Homo sapiens LP6728 mRNA, complete cds PA
AF304463.1 Homo sapiens calcium transport protein CaT1 mRNA, complete cds P
AJ243501.2 Homo sapiens mRNA for transient receptor potential channel 6, subfamily V, (TRPV6 gene) PA
AJ243500.2 Homo sapiens mRNA for transient receptor potential channel 6, subfamily V, (TRPV6 gene) PA
BC007094.1 Homo sapiens transient receptor potential cation channel, subfamily V, member 6, mRNA (cDNA clone IMAGE:4251303), with apparent retained intron A
BC113101.1 Homo sapiens cDNA clone IMAGE:40076830
AF365927.1 Homo sapiens calcium transport protein CaT1 mRNA, complete cds PA
AK291707.1 Homo sapiens cDNA FLJ77566 complete cds, highly similar to Homo sapiens transient receptor potential cation channel, subfamily V, member 6 (TRPV6), mRNA P
AF365928.1 Homo sapiens calcium transport protein CaT1 mRNA, complete cds, alternatively spliced PA
NM_018646.3 Homo sapiens transient receptor potential cation channel, subfamily V, member 6 (TRPV6), mRNA PA
AJ487964.2 Homo sapiens mRNA for transient receptor potential cation channel subfamily V, member 6 (TRPV6 gene) PA
BC034814.1 Homo sapiens transient receptor potential cation channel, subfamily V, member 6, mRNA (cDNA clone IMAGE:4516052), complete cds A
AK075206.1 Homo sapiens cDNA FLJ90725 fis, clone PLACE1009527, weakly similar to Oryctolagus cuniculus mRNA for epithelial calcium channel P
AK075103.1 Homo sapiens cDNA FLJ90622 fis, clone PLACE1002726, moderately similar to Oryctolagus cuniculus mRNA for epithelial calcium channel P
AJ277909.1 Homo sapiens partial mRNA for epithelial calcium channel ECAC2 (ECAC2 gene) P
U82613.1 Human DNA-binding protein ABP/ZF mRNA, complete cds PA
X83877.1 H.sapiens mRNA for ABP/ZF PA

EST sequences (10 of 106) [Show all sequences]

AA908264.1 Clone IMAGE:1441614 mammary gland 3' read A
CB155548.1 Clone B2N807043-33-D03 brain 5' read P
AI611008.1 Clone IMAGE:2252413 prostate 3' read A
BX334549.2 Clone CS0DI004YA02 placenta 3' read P
BX334550.2 Clone CS0DI004YA02 placenta 5' read P
BX371488.1 Clone CS0DI004YA02 placenta 3' read P
BX389466.2 Clone CS0DI004YA02 placenta 5' read P
BX402866.2 Clone CS0DJ012YA02 blood 3' read P
BX402867.2 Clone CS0DJ012YA02 blood 5' read P
AI969838.1 Clone IMAGE:2477119 prostate 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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