> Cytochrome c-1 (CYC1)
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UGID:178533     UniGene Hs.289271     Homo sapiens (human)   CYC1 Order cDNA clone, Links
Cytochrome c-1 (CYC1)

Human protein-coding gene CYC1. Represented by 839 ESTs from 257 cDNA libraries. Corresponds to reference sequence NM_001916.3. [UniGene 178533 - Hs.289271]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_528263.3 PREDICTED: cytochrome c1, heme protein, mitochondrial P. troglodytes 100.0 324
NP_001907.2 CYC1 gene product H. sapiens 100.0 324
NP_079843.1 Cyc1 gene product M. musculus 94.8 324
NP_001032470.1 cyc1 gene product D. rerio 83.7 299
NP_001089640.1 uncharacterized protein LOC734700 X. laevis 79.3 308
NP_647958.1 CG4769, isoform A D. melanogaster 69.5 285
NP_001154756.1 ubiquinol-cytochrome c reductase cytochrome c1 subunit A. thaliana 65.9 258
NP_014708.1 ubiquinol--cytochrome-c reductase catalytic subunit CYT1 S. cerevisiae 64.6 285
XP_963756.1 cytochrome c1, mitochondrial precursor N. crassa 63.4 309
XP_001690765.1 ubiquinol:cytochrome c oxidoreductase cytochrome c1 C. reinhardtii 58.3 312
NP_492207.1 Protein CYC-1 C. elegans 57.2 282
Other hits (2 of 56) [Show all]SpeciesId(%)Len(aa)
XP_001089897.1 PREDICTED: cytochrome c1, heme protein, mitochondrial-like isoform 2 M. mulatta 97.5 324
XP_003918791.1 PREDICTED: cytochrome c1, heme protein, mitochondrial-like P. anubis 97.5 324

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; skin; brain; pancreas; intestine; muscle; eye; kidney; prostate; placenta; uterus; mammary gland; uncharacterized tissue; lymph; stomach; liver; mixed; mouth; bladder; ovary; parathyroid; testis; ascites; embryonic tissue; tonsil; adrenal gland; salivary gland; heart; lymph node; bone; blood; epididymis; cervix; bone marrow; connective tissue; thyroid; umbilical cord; larynx; vascular; thymus; pineal gland; pharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8q24.3
UniSTS entry: Chr 8 RH11674
UniSTS entry: Chr 1 GDB:182516
UniSTS entry: Chr 11 RH27395
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

NM_001916.3 Homo sapiens cytochrome c-1 (CYC1), nuclear gene encoding mitochondrial protein, mRNA PA
CR541674.1 Homo sapiens full open reading frame cDNA clone RZPDo834A0328D for gene CYC1, cytochrome c-1; complete cds, incl. stopcodon P
BT019798.1 Homo sapiens cytochrome c-1 mRNA, complete cds P
AK026633.1 Homo sapiens cDNA: FLJ22980 fis, clone KAT11387, highly similar to HSCYC1 Human mRNA for cytochrome c1 PA
BC001006.1 Homo sapiens cytochrome c-1, mRNA (cDNA clone MGC:8481 IMAGE:2821836), complete cds PA
AK225796.1 Homo sapiens mRNA for cytochrome c-1 variant, clone: FCC131B02 PA
BC015616.2 Homo sapiens cytochrome c-1, mRNA (cDNA clone MGC:23492 IMAGE:4840922), complete cds PA
X06994.1 Human mRNA for cytochrome c1 P
BC020566.1 Homo sapiens cytochrome c-1, mRNA (cDNA clone MGC:21555 IMAGE:4157475), complete cds PA
BC024650.1 Homo sapiens, clone IMAGE:4470223, mRNA, partial cds PA
M16597.1 Human cytochrome c1 mRNA, partial cds P

EST sequences (10 of 839) [Show all sequences]

AA863409.1 Clone IMAGE:1456880 kidney 3' read A
AA969477.1 Clone IMAGE:1572618 kidney 3' read PA
AA972647.1 Clone IMAGE:1585062 lung 3' read A
AA996385.1 Clone IMAGE:1604563 lung 3' read A
AI078786.1 Clone IMAGE:1677236 mixed 3' read PA
AI088963.1 Clone IMAGE:1634700 mixed 3' read A
AI127054.1 Clone IMAGE:1708043 heart 3' read PA
AI128530.1 Clone IMAGE:1714732 placenta 3' read PA
AI143421.1 Clone IMAGE:1690637 mixed 3' read PA
CB045645.1 Clone IMAGE:3218462 intestine 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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