> Syntaxin binding protein 1 (STXBP1)
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UGID:178264     UniGene Hs.288229     Homo sapiens (human)   STXBP1 Order cDNA clone, Links
Syntaxin binding protein 1 (STXBP1)

Human protein-coding gene STXBP1. Represented by 1133 ESTs from 240 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 178264 - Hs.288229]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001107041.1 Stxbp1 gene product M. musculus 100.0 602
XP_003911968.1 PREDICTED: syntaxin-binding protein 1 isoform 2 P. anubis 100.0 602
NP_003156.1 STXBP1 gene product H. sapiens 100.0 602
NP_037170.1 Stxbp1 gene product R. norvegicus 100.0 593
XP_001095617.2 PREDICTED: syntaxin-binding protein 1 isoform 1 M. mulatta 100.0 593
XP_003122217.3 PREDICTED: syntaxin-binding protein 1-like S. scrofa 100.0 593
NP_777044.1 STXBP1 gene product B. taurus 100.0 593
XP_004005673.1 PREDICTED: syntaxin-binding protein 1 isoform 1 O. aries 100.0 593
XP_851554.2 PREDICTED: syntaxin-binding protein 1 C. lupus familiaris 100.0 579
XP_001501579.1 PREDICTED: syntaxin-binding protein 1 E. caballus 100.0 579
XP_003312377.1 PREDICTED: syntaxin-binding protein 1 isoform 1 P. troglodytes 99.8 579
XP_001365291.1 PREDICTED: syntaxin-binding protein 1-like M. domestica 99.7 588
NP_001093335.1 syntaxin binding protein 1 X. laevis 96.0 594
NP_001020353.1 stxbp1a gene product D. rerio 93.2 590
NP_523916.2 Ras opposite, isoform A D. melanogaster 72.9 596
NP_001024606.1 Protein UNC-18, isoform a C. elegans 64.0 587
Other hits (2 of 27) [Show all]SpeciesId(%)Len(aa)
NP_996859.1 STXBP1 gene product G. gallus 99.2 593
XP_001508183.2 PREDICTED: syntaxin-binding protein 1-like O. anatinus 99.0 597

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; eye; testis; skin; kidney; lung; cervix; thymus; spleen; esophagus; ascites; pancreas; mixed; uncharacterized tissue; adipose tissue; placenta; bone marrow; adrenal gland; bladder; muscle; mammary gland; connective tissue; uterus; intestine; prostate; amniotic fluid; thyroid; bone; trachea; vascular; embryonic tissue; nerve; liver; pituitary gland; umbilical cord; pineal gland; pharynx; ovary
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q34.1
UniSTS entry: Chr 9 WI-17094 [Map Viewer]
UniSTS entry: Chr 9 D9S1144 [Map Viewer]
UniSTS entry: Chr 9 STXBP1_858.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

NM_003165.3 Homo sapiens syntaxin binding protein 1 (STXBP1), transcript variant 1, mRNA PA
Y12723.1 H.sapiens mRNA for STXBP1 protein P
AB209180.1 Homo sapiens mRNA for Syntaxin binding protein 1 variant protein P
NM_001032221.3 Homo sapiens syntaxin binding protein 1 (STXBP1), transcript variant 2, mRNA PA
BC015749.1 Homo sapiens syntaxin binding protein 1, mRNA (cDNA clone MGC:23061 IMAGE:4868854), complete cds PA
AK094794.1 Homo sapiens cDNA FLJ37475 fis, clone BRAWH2012698 A
AK295802.1 Homo sapiens cDNA FLJ55070 complete cds, highly similar to Syntaxin-binding protein 1 P
AK295154.1 Homo sapiens cDNA FLJ54602 complete cds, highly similar to Syntaxin-binding protein 1 P
AK293984.1 Homo sapiens cDNA FLJ55678 complete cds, highly similar to Syntaxin-binding protein 1 P
D63851.1 Homo sapiens mRNA for unc-18 homologue, complete cds P
AF004562.1 Homo sapiens hUNC18a alternatively-spliced mRNA, complete cds PA
AF004563.1 Homo sapiens hUNC18b alternatively-spliced mRNA, complete cds PA

EST sequences (10 of 1133) [Show all sequences]

AA864978.1 Clone IMAGE:1456489 kidney 3' read
R15769.1 Clone IMAGE:53262 brain 3' read A
R16273.1 Clone IMAGE:53262 brain 5' read
AA984625.1 Clone IMAGE:1629938 brain 3' read P
AA985140.1 Clone IMAGE:1616279 brain 3' read
AA985296.1 Clone IMAGE:1616226 brain 3' read
T05584.1 Clone HFBDC73 brain
R17482.1 Clone IMAGE:32442 brain 5' read
AI002999.1 Clone IMAGE:1683888 brain 3' read P
AA911680.1 Clone IMAGE:1526842 mixed 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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