> ADP-ribosylation factor 1 (ARF1)
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UGID:177485     UniGene Hs.286221     Homo sapiens (human)   ARF1 Order cDNA clone, Links
ADP-ribosylation factor 1 (ARF1)

Human protein-coding gene ARF1. Represented by 2997 ESTs from 590 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 177485 - Hs.286221]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001123880.1 Arf1 gene product M. musculus 100.0 180
NP_071963.1 Arf1 gene product R. norvegicus 100.0 180
XP_003221953.1 PREDICTED: ADP-ribosylation factor 1-like A. carolinensis 100.0 180
XP_003963122.1 PREDICTED: ADP-ribosylation factor 3-like T. rubripes 100.0 180
XP_002194825.1 PREDICTED: ADP-ribosylation factor 1 T. guttata 100.0 180
XP_004068533.1 PREDICTED: ADP-ribosylation factor 3-like O. latipes 100.0 180
XP_003441516.1 PREDICTED: ADP-ribosylation factor 3-like O. niloticus 100.0 180
NP_001177323.1 arf-1 protein X. laevis 100.0 180
NP_989018.1 arf5 gene product X. tropicalis 100.0 180
NP_001006352.1 ARF1 gene product G. gallus 100.0 180
XP_003206931.1 PREDICTED: ADP-ribosylation factor 1-like M. gallopavo 100.0 180
XP_513698.2 PREDICTED: ADP-ribosylation factor 1-like isoform 2 P. troglodytes 100.0 180
NP_001649.1 ARF1 gene product H. sapiens 100.0 180
NP_001238856.1 ARF1 gene product C. lupus familiaris 100.0 180
XP_001494680.1 PREDICTED: ADP-ribosylation factor 1-like isoform 1 E. caballus 100.0 180
NP_001153899.1 ARF1 gene product S. scrofa 100.0 180
NP_788826.1 ARF1 gene product B. taurus 100.0 180
NP_001156016.1 ARF1 gene product O. aries 100.0 180
XP_002723898.1 PREDICTED: ADP-ribosylation factor 1-like O. cuniculus 100.0 180
NP_958888.1 arf1l gene product D. rerio 99.5 180
NP_001097667.1 ADP ribosylation factor 79F, isoform F D. melanogaster 98.9 181
NP_498235.1 Protein ARF-1.2 C. elegans 98.3 180
NP_172533.2 ADP-ribosylation factor A1F A. thaliana 97.2 180
XP_001690893.1 small ARF-related GTPase C. reinhardtii 96.1 180
XP_965243.1 ADP-ribosylation factor 1 N. crassa 94.6 184
NP_010144.1 Arf2p S. cerevisiae 82.9 180
Other hits (2 of 51) [Show all]SpeciesId(%)Len(aa)
XP_002413376.1 ADP-ribosylation factor I. scapularis 99.5 180
NP_001133306.1 ADP-ribosylation factor 3 S. salar 99.5 180

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; lung; testis; uncharacterized tissue; intestine; eye; uterus; pancreas; skin; embryonic tissue; mammary gland; liver; kidney; mixed; connective tissue; prostate; heart; ascites; stomach; blood; muscle; lymph; cervix; bone; mouth; ovary; lymph node; adrenal gland; thymus; salivary gland; adipose tissue; esophagus; bladder; spleen; thyroid; umbilical cord; pharynx; vascular; pituitary gland; parathyroid; larynx; ganglia; trachea; bone marrow; nerve; epididymis; tonsil; ear; peritoneum; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q42
UniSTS entry: Chr 1 RH64921
UniSTS entry: Chr 1 RH80951
UniSTS entry: Chr 1 D1S3252 [Map Viewer]
UniSTS entry: Chr 1 RH79647
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (22)

AF052179.1 Homo sapiens clone 24537 ADP-ribosylation factor 1 mRNA, complete cds PA
BT007393.1 Homo sapiens ADP-ribosylation factor 1 mRNA, complete cds P
AK130737.1 Homo sapiens cDNA FLJ27227 fis, clone SYN05501, highly similar to ADP-ribosylation factor 1 P
NM_001658.3 Homo sapiens ADP-ribosylation factor 1 (ARF1), transcript variant 4, mRNA PA
AK000620.1 Homo sapiens cDNA FLJ20613 fis, clone KAT05486, highly similar to M36340 Human ADP-ribosylation factor 1 PA
NM_001024228.1 Homo sapiens ADP-ribosylation factor 1 (ARF1), transcript variant 2, mRNA PA
NM_001024227.1 Homo sapiens ADP-ribosylation factor 1 (ARF1), transcript variant 1, mRNA PA
NM_001024226.1 Homo sapiens ADP-ribosylation factor 1 (ARF1), transcript variant 3, mRNA PA
AK023803.1 Homo sapiens cDNA FLJ13741 fis, clone PLACE3000208
BC009247.2 Homo sapiens ADP-ribosylation factor 1, mRNA (cDNA clone MGC:3958 IMAGE:2963635), complete cds PA
BC010429.1 Homo sapiens ADP-ribosylation factor 1, mRNA (cDNA clone MGC:15747 IMAGE:3356859), complete cds PA
BC010415.2 Homo sapiens ADP-ribosylation factor 1, mRNA (cDNA clone IMAGE:4024984), partial cds A
BC011358.1 Homo sapiens ADP-ribosylation factor 1, mRNA (cDNA clone MGC:9347 IMAGE:3463523), complete cds PA
AK057875.1 Homo sapiens cDNA FLJ25146 fis, clone CBR07332, highly similar to ADP-RIBOSYLATION FACTOR 1 P
AK057838.1 Homo sapiens cDNA FLJ25109 fis, clone CBR01561, highly similar to ADP-RIBOSYLATION FACTOR 1 P
AF493881.1 Homo sapiens ADP-ribosylation factor protein 1 (ARF1) mRNA, complete cds P
AK293553.1 Homo sapiens cDNA FLJ61099 complete cds, highly similar to ADP-ribosylation factor 1 P
AK297792.1 Homo sapiens cDNA FLJ51902 complete cds, highly similar to ADP-ribosylation factor 1 P
AK296020.1 Homo sapiens cDNA FLJ51215 complete cds, highly similar to ADP-ribosylation factor 1 P
M84326.1 Human ADP-ribosylation factor 1 mRNA, complete cds P
M36340.1 Human ADP-ribosylation factor 1 (ARF1) mRNA, complete cds P
AF055002.1 Homo sapiens clone 24614 ADP-ribosylation factor 1 mRNA, complete cds PA

EST sequences (10 of 2997) [Show all sequences]

AA972663.1 Clone IMAGE:1585077 lung 3' read P
AA976750.1 Clone IMAGE:1585813 uncharacterized tissue 3' read A
AA999792.1 Clone IMAGE:1606909 kidney 3' read A
AA907387.1 Clone IMAGE:1521721 lung 3' read
AI017058.1 Clone IMAGE:1636039 kidney 3' read A
AI018072.1 Clone IMAGE:1642113 testis 3' read A
AA922506.1 Clone IMAGE:1551587 uncharacterized tissue 3' read A
AI022344.1 Clone IMAGE:1651616 skin 3' read A
AI024174.1 Clone IMAGE:1642984 testis 3' read A
R18842.1 Clone IMAGE:33192 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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