> Pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (PLEKHG5)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:177022     UniGene Hs.284232     Homo sapiens (human)   PLEKHG5 Order cDNA clone, Links
Pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (PLEKHG5)

Human protein-coding gene PLEKHG5. Represented by 187 ESTs from 91 cDNA libraries. Corresponds to 8 reference sequences (different isoforms). [UniGene 177022 - Hs.284232]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001252521.1 PLEKHG5 gene product H. sapiens 100.0 1084
NP_001004156.1 Plekhg5 gene product M. musculus 90.7 1070
XP_002666567.2 PREDICTED: pleckstrin homology domain-containing family G member 5-like D. rerio 61.4 1068
Other hits (2 of 24) [Show all]SpeciesId(%)Len(aa)
XP_001092760.2 PREDICTED: pleckstrin homology domain-containing family G member 5 isoform 1 M. mulatta 97.8 1079
XP_003891091.1 PREDICTED: LOW QUALITY PROTEIN: pleckstrin homology domain-containing family G member 5 P. anubis 97.3 1093

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; placenta; mouth; thyroid; eye; stomach; embryonic tissue; prostate; spleen; vascular; trachea; kidney; skin; uncharacterized tissue; ovary; heart; intestine; lung; mixed; uterus; thymus; larynx; ascites; muscle; connective tissue; liver; bone; pancreas; mammary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p36.31
UniSTS entry: Chr 1 SHGC-156104
UniSTS entry: Chr 1 SHGC-74157 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (18)

AB018263.2 Homo sapiens mRNA for KIAA0720 protein, partial cds P
AB097001.1 Homo sapiens mRNA for putative NFkB activating protein, complete cds, clone: 015N P
NM_020631.4 Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (PLEKHG5), transcript variant 1, mRNA P
AK125550.1 Homo sapiens cDNA FLJ43562 fis, clone PUAEN2005930 P
NM_198681.3 Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (PLEKHG5), transcript variant 2, mRNA P
AK024676.1 Homo sapiens cDNA: FLJ21023 fis, clone CAE06432 PA
NM_001042665.1 Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (PLEKHG5), transcript variant 5, mRNA P
NM_001042664.1 Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (PLEKHG5), transcript variant 4, mRNA P
NM_001042663.1 Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (PLEKHG5), transcript variant 3, mRNA P
BC015231.1 Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5, mRNA (cDNA clone MGC:17838 IMAGE:3900065), complete cds PA
AK096347.1 Homo sapiens cDNA FLJ39028 fis, clone NT2RP7006395, highly similar to Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5, transcript variant 1, mRNA PA
AK301239.1 Homo sapiens cDNA FLJ59769 complete cds, highly similar to Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5, transcript variant 1, mRNA P
AK299523.1 Homo sapiens cDNA FLJ56148 complete cds, highly similar to Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5, transcript variant 1, mRNA P
AK294875.1 Homo sapiens cDNA FLJ59684 complete cds, highly similar to Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5, transcript variant 1, mRNA P
BC036671.2 Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5, mRNA (cDNA clone IMAGE:4811640) PA
NM_001265593.1 Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (PLEKHG5), transcript variant 7, mRNA P
NM_001265594.1 Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (PLEKHG5), transcript variant 8, mRNA P
NM_001265592.1 Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (PLEKHG5), transcript variant 6, mRNA P

EST sequences (10 of 187) [Show all sequences]

AA905433.1 Clone IMAGE:1506192 mixed 3' read
AI015184.1 Clone IMAGE:1623295 embryonic tissue 3' read
AI093105.1 Clone IMAGE:1694685 heart 3' read
R24817.1 Clone IMAGE:35464 brain 5' read P
BX116749.1 Clone IMAGp998L22160_;_IMAGE:35464 brain A
CB150376.1 Clone L12JSHC0s1-4-D05 liver 5' read P
CB147078.1 Clone L13SNU387s1-4-D05 liver 5' read P
R34121.1 Clone IMAGE:136317 placenta 5' read P
R34122.1 Clone IMAGE:136317 placenta 3' read
AI621175.1 Clone IMAGE:2258131 stomach 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help