> Mitochondrial ribosomal protein L47 (MRPL47)
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UGID:176813     UniGene Hs.283734     Homo sapiens (human)   MRPL47 Order cDNA clone, Links
Mitochondrial ribosomal protein L47 (MRPL47)

Human protein-coding gene MRPL47. Represented by 230 ESTs from 115 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 176813 - Hs.283734]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_065142.2 MRPL47 gene product H. sapiens 100.0 249
XP_001108605.1 PREDICTED: 39S ribosomal protein L47, mitochondrial-like isoform 3 M. mulatta 99.6 249
XP_003894849.1 PREDICTED: 39S ribosomal protein L47, mitochondrial isoform 1 P. anubis 99.6 249
XP_526391.3 PREDICTED: 39S ribosomal protein L47, mitochondrial isoform 5 P. troglodytes 99.6 249
NP_083293.1 39S ribosomal protein L47, mitochondrial M. musculus 89.7 251
XP_686002.1 PREDICTED: 39S ribosomal protein L47, mitochondrial-like D. rerio 73.3 187
Other hits (2 of 23) [Show all]SpeciesId(%)Len(aa)
XP_001495534.1 PREDICTED: 39S ribosomal protein L47, mitochondrial-like E. caballus 93.6 249
XP_003132595.1 PREDICTED: 39S ribosomal protein L47, mitochondrial-like S. scrofa 92.5 251

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mouth; brain; embryonic tissue; placenta; spinal cord; intestine; eye; lung; uncharacterized tissue; pancreas; ovary; cervix; bladder; pharynx; larynx; adrenal gland; prostate; testis; skin; mixed; salivary gland; connective tissue; mammary gland; vascular; kidney; liver; parathyroid; blood; lymph; stomach; uterus; thyroid; ascites; muscle; heart; nerve; bone marrow; lymph node; bone; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3q26.33
UniSTS entry: Chr 3 SHGC-77570 [Map Viewer]
UniSTS entry: Chr 3 STS-N29372 [Map Viewer]
UniSTS entry: Chr 1 D10S16
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

NM_020409.2 Homo sapiens mitochondrial ribosomal protein L47 (MRPL47), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA PA
NM_177988.1 Homo sapiens mitochondrial ribosomal protein L47 (MRPL47), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA PA
AY212270.1 Homo sapiens nasopharyngeal carcinoma metastasis-related 1 (NCM1) mRNA, complete cds PA
BC032522.1 Homo sapiens mitochondrial ribosomal protein L47, mRNA (cDNA clone MGC:45403 IMAGE:5500168), complete cds PA
BC021575.1 Homo sapiens mitochondrial ribosomal protein L47, mRNA (cDNA clone MGC:31986 IMAGE:3161966), complete cds PA

EST sequences (10 of 230) [Show all sequences]

AI040005.1 Clone IMAGE:1664284 skin 3' read A
AA909773.1 Clone IMAGE:1476553 uncharacterized tissue 3' read P
CB053536.1 Clone IMAGE:3290798 uncharacterized tissue 3' read PA
CB053537.1 Clone IMAGE:3290798 uncharacterized tissue 5' read P
AI189156.1 Clone IMAGE:1722722 placenta 3' read P
AI202548.1 Clone IMAGE:1942993 prostate 3' read A
CB158416.1 Clone L18POOL1n1-31-H07 liver 5' read P
CB151183.1 Clone C1SNU17-25-G09 cervix 5' read P
CB116357.1 Clone L10ChoCK0-5-E10 liver 5' read A
CB141843.1 Clone L11SNU354s1-24-G03 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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