> Sulfatase modifying factor 2 (SUMF2)
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UGID:175399     UniGene Hs.279696     Homo sapiens (human)   SUMF2 Order cDNA clone, Links
Sulfatase modifying factor 2 (SUMF2)

Human protein-coding gene SUMF2. Represented by 711 ESTs from 302 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 175399 - Hs.279696]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001123541.1 SUMF2 gene product H. sapiens 100.0 357
XP_003689431.1 PREDICTED: sulfatase-modifying factor 2 isoform 1 M. musculus 90.1 301
NP_001005980.1 sumf2 gene product D. rerio 75.8 268
NP_001085188.1 sulfatase modifying factor 2 X. laevis 69.3 101
NP_612003.1 CG7049 D. melanogaster 48.5 269
Other hits (2 of 38) [Show all]SpeciesId(%)Len(aa)
XP_001160140.1 PREDICTED: sulfatase-modifying factor 2 isoform 9 P. troglodytes 99.4 357
XP_003895998.1 PREDICTED: sulfatase-modifying factor 2 isoform 1 P. anubis 98.4 319

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mammary gland; placenta; kidney; skin; testis; prostate; bladder; ovary; lymph node; connective tissue; blood; uterus; stomach; uncharacterized tissue; intestine; pharynx; esophagus; lung; liver; eye; thymus; thyroid; embryonic tissue; muscle; vascular; umbilical cord; adrenal gland; spleen; trachea; lymph; pancreas; salivary gland; ascites; mixed; cervix; adipose tissue; amniotic fluid; bone marrow; heart; mouth; nerve; ganglia; larynx; bone; epididymis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7q11.1
UniSTS entry: Chr 7 RH93783
UniSTS entry: Chr 7 RH65154 [Map Viewer]
UniSTS entry: Chr 7 G62095
UniSTS entry: Chr 1 D10S16
UniSTS entry: Chr 1 D1S1425
UniSTS entry: Chr 1 D11S3114
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

AY323911.1 Homo sapiens sulfatase modifying factor 2 mRNA, complete cds P
AY359103.1 Homo sapiens clone DNA93020 ARHG1968 (UNQ1968) mRNA, complete cds PA
BC084539.1 Homo sapiens sulfatase modifying factor 2, mRNA (cDNA clone MGC:99485 IMAGE:6599080), complete cds PA
CR936757.1 Homo sapiens mRNA; cDNA DKFZp781L1035 (from clone DKFZp781L1035) PA
CR936749.1 Homo sapiens mRNA; cDNA DKFZp686L17160 (from clone DKFZp686L17160) PA
BC111092.1 Homo sapiens sulfatase modifying factor 2, mRNA (cDNA clone MGC:133350 IMAGE:40068651), complete cds P
NM_001042470.1 Homo sapiens sulfatase modifying factor 2 (SUMF2), transcript variant 4, mRNA PA
NM_001042469.1 Homo sapiens sulfatase modifying factor 2 (SUMF2), transcript variant 3, mRNA PA
BC006159.1 Homo sapiens sulfatase modifying factor 2, mRNA (cDNA clone IMAGE:3635549), partial cds PA
BC015600.2 Homo sapiens sulfatase modifying factor 2, mRNA (cDNA clone IMAGE:4653574), partial cds PA
NM_001130069.2 Homo sapiens sulfatase modifying factor 2 (SUMF2), transcript variant 5, mRNA PA
AK301627.1 Homo sapiens cDNA FLJ59089 complete cds, highly similar to Homo sapiens sulfatase modifying factor 2 (SUMF2), transcript variant 4, mRNA P
AK298605.1 Homo sapiens cDNA FLJ59949 complete cds, highly similar to Homo sapiens sulfatase modifying factor 2 (SUMF2), transcript variant 4, mRNA P
AK300488.1 Homo sapiens cDNA FLJ59985 complete cds, highly similar to Sulfatase-modifying factor 2 precursor P
AK297793.1 Homo sapiens cDNA FLJ54105 complete cds, highly similar to Sulfatase-modifying factor 2 precursor P
AK297042.1 Homo sapiens cDNA FLJ54722 complete cds, highly similar to Sulfatase-modifying factor 2 precursor P
AK075477.1 Homo sapiens cDNA PSEC0171 fis, clone PLACE1011514, highly similar to Sulfatase modifying factor 2 precursor P
AF075046.1 Homo sapiens full length insert cDNA YN68C05 A
NM_001146333.1 Homo sapiens sulfatase modifying factor 2 (SUMF2), transcript variant 7, mRNA PA
NM_015411.2 Homo sapiens sulfatase modifying factor 2 (SUMF2), transcript variant 2, mRNA PA

EST sequences (10 of 711) [Show all sequences]

BX117968.1 Clone IMAGp998E15219_;_IMAGE:145526 placenta
AI193372.1 Clone IMAGE:1743130 lung 3' read PA
AI204915.1 Clone IMAGE:1684761 brain 3' read
CB105170.1 Clone L1HLK1-2-C11 liver 5' read
CB138051.1 Clone L5HLK1-39-A02 liver 5' read P
CB137327.1 Clone L6ChoCK0-24-C04 liver 5' read A
CB120903.1 Clone L10ChoCK0-14-F10 liver 5' read
CB139476.1 Clone L15CKK1-17-A02 liver 5' read P
AA886476.1 Clone IMAGE:1274678 bone
AI280553.1 Clone IMAGE:1963927 ovary 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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