> Tumor necrosis factor receptor superfamily, member 1A (TNFRSF1A)
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UGID:175356     UniGene Hs.279594     Homo sapiens (human)   TNFRSF1A Order cDNA clone, Links
Tumor necrosis factor receptor superfamily, member 1A (TNFRSF1A)

Human protein-coding gene TNFRSF1A. Represented by 1688 ESTs from 319 cDNA libraries. Corresponds to reference sequence NM_001065.3. [UniGene 175356 - Hs.279594]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001056.1 TNFRSF1A gene product H. sapiens 100.0 454
XP_522334.3 PREDICTED: tumor necrosis factor receptor superfamily member 1A P. troglodytes 99.5 426
NP_035739.2 Tnfrsf1a gene product M. musculus 72.8 449
Other hits (2 of 9) [Show all]SpeciesId(%)Len(aa)
XP_002798501.1 PREDICTED: tumor necrosis factor receptor superfamily member 1A isoform 2 M. mulatta 97.4 346
XP_003905894.1 PREDICTED: tumor necrosis factor receptor superfamily member 1A isoform 2 P. anubis 96.8 464

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; connective tissue; uterus; lung; intestine; uncharacterized tissue; blood; kidney; spleen; testis; placenta; thymus; skin; prostate; vascular; mammary gland; liver; trachea; adrenal gland; stomach; mouth; embryonic tissue; eye; cervix; heart; esophagus; pharynx; ascites; bone marrow; nerve; bone; mixed; bladder; larynx; ovary; muscle; pancreas; ganglia; thyroid; umbilical cord; adipose tissue; epididymis; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12p13.2
UniSTS entry: Chr 12 WI-18755 [Map Viewer]
UniSTS entry: Chr 12 G15949
UniSTS entry: Chr 12 RH75052
UniSTS entry: Chr 12 STS-M58286 [Map Viewer]
UniSTS entry: Chr 12 GDB:384764
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

M58286.1 Homo sapiens tumor necrosis factor receptor mRNA, complete cds PA
M63121.1 Human tumor necrosis factor receptor (TNF receptor) mRNA, complete cds P
M60275.1 Human tumor necrosis factor receptor(TNF) mRNA, complete cds P
NM_001065.3 Homo sapiens tumor necrosis factor receptor superfamily, member 1A (TNFRSF1A), mRNA PA
AY182755.1 Homo sapiens tumor necrosis factor receptor superfamily member 1A (TNFRSF1A) mRNA, exon 3 and partial cds
M33294.1 Human tumor necrosis factor receptor mRNA, complete cds P
BC010140.2 Homo sapiens tumor necrosis factor receptor superfamily, member 1A, mRNA (cDNA clone MGC:19588 IMAGE:4131360), complete cds PA
AK056611.1 Homo sapiens cDNA FLJ32049 fis, clone NTONG2001220, highly similar to Tumor necrosis factor receptor superfamily member 1A precursor P
AK291088.1 Homo sapiens cDNA FLJ78443 complete cds, highly similar to Homo sapiens tumor necrosis factor receptor superfamily, member 1A (TNFRSF1A), mRNA P
AK315509.1 Homo sapiens cDNA, FLJ96574, highly similar to Homo sapiens tumor necrosis factor receptor superfamily, member 1A (TNFRSF1A), mRNA P
AK308061.1 Homo sapiens cDNA, FLJ98009 P
EU927389.1 Homo sapiens tumor necrosis factor receptor 1A isoform beta (TNFRSF1A) mRNA, complete cds, alternatively spliced P
JN172914.1 Homo sapiens TNFR1-d2 (TNFRSF1A) mRNA, complete cds P

EST sequences (10 of 1688) [Show all sequences]

CB053609.1 Clone IMAGE:3290948 uncharacterized tissue 3' read A
CB053610.1 Clone IMAGE:3290948 uncharacterized tissue 5' read P
AI186844.1 Clone IMAGE:1741102 lung 3' read PA
CB105436.1 Clone L1HLK1-4-G11 liver 5' read P
CB134521.1 Clone L5HLK1-25-F05 liver 5' read P
CB153130.1 Clone B1T694954-23-B07 brain 5' read P
CB151421.1 Clone C1SNU17-29-E06 cervix 5' read P
CB142205.1 Clone L11SNU354s1-19-E03 liver 5' read
CB144926.1 Clone L11SNU354s1-26-H05 liver 5' read P
CB131061.1 Clone L13SNU387-14-E10 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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