> Mediator complex subunit 20 (MED20)
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UGID:174861     UniGene Hs.278434     Homo sapiens (human)   MED20 Order cDNA clone, Links
Mediator complex subunit 20 (MED20)

Human protein-coding gene MED20. Represented by 389 ESTs from 179 cDNA libraries. Corresponds to reference sequence NM_004275.3. [UniGene 174861 - Hs.278434]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001233419.1 MED20 gene product P. troglodytes 100.0 211
NP_004266.2 MED20 gene product H. sapiens 100.0 211
XP_538917.3 PREDICTED: mediator of RNA polymerase II transcription subunit 20 C. lupus familiaris 100.0 211
NP_001162222.1 MED20 gene product P. anubis 100.0 203
XP_002714442.1 PREDICTED: Trf-proximal protein homolog O. cuniculus 99.5 211
NP_064432.1 mediator of RNA polymerase II transcription subunit 20 M. musculus 98.6 211
NP_001084734.1 mediator of RNA polymerase II transcription subunit 20 X. laevis 82.0 210
NP_001003585.1 med20 gene product D. rerio 72.2 211
Other hits (2 of 23) [Show all]SpeciesId(%)Len(aa)
NP_001013196.1 Med20 gene product R. norvegicus 99.1 211
NP_001193281.1 MED20 gene product S. scrofa 99.1 211

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; ascites; testis; stomach; mixed; trachea; vascular; mouth; blood; adrenal gland; intestine; uncharacterized tissue; cervix; thymus; eye; embryonic tissue; prostate; heart; parathyroid; placenta; kidney; pancreas; liver; skin; lung; mammary gland; uterus; salivary gland; lymph; connective tissue; spleen; ovary; esophagus; bone; bone marrow; pharynx; pituitary gland; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p21.1
UniSTS entry: Chr 6 A002F15 [Map Viewer]
UniSTS entry: Chr 1 D11S3114
UniSTS entry: Chr 1 D8S2278
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (17)

AL050196.1 Homo sapiens mRNA; cDNA DKFZp586D2223 (from clone DKFZp586D2223) PA
AF097725.1 Homo sapiens TRF-proximal protein mRNA, complete cds P
NM_004275.3 Homo sapiens mediator complex subunit 20 (MED20), mRNA P
BC063509.1 Homo sapiens cDNA clone IMAGE:3862384, partial cds A
BC032552.1 Homo sapiens mediator complex subunit 20, mRNA (cDNA clone MGC:45256 IMAGE:5555309), complete cds PA
BC012618.1 Homo sapiens mediator complex subunit 20, mRNA (cDNA clone MGC:13654 IMAGE:4272961), complete cds PA
AK023092.1 Homo sapiens cDNA FLJ13030 fis, clone NT2RP3001111, highly similar to Homo sapiens TRF-proximal protein mRNA P
BC019866.1 Homo sapiens mediator complex subunit 20, mRNA (cDNA clone MGC:29869 IMAGE:4470496), complete cds PA
BC015189.1 Homo sapiens Trf (TATA binding protein-related factor)-proximal homolog (Drosophila), mRNA (cDNA clone IMAGE:4077017) PA
AJ420544.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1476271 PA
AK307070.1 Homo sapiens cDNA, FLJ97018 P
AK097385.1 Homo sapiens cDNA FLJ40066 fis, clone TESOP2000510, highly similar to TRF-proximal protein homolog P
AK300573.1 Homo sapiens cDNA FLJ60159 complete cds, highly similar to TRF-proximal protein homolog P
AK293412.1 Homo sapiens cDNA FLJ53711 complete cds, highly similar to TRF-proximal protein homolog P
AF116602.1 Homo sapiens PRO0213 mRNA, complete cds A
BC033498.1 Homo sapiens Trf (TATA binding protein-related factor)-proximal homolog (Drosophila), mRNA (cDNA clone IMAGE:5174972) A
BC040950.1 Homo sapiens mediator complex subunit 20, mRNA (cDNA clone MGC:48835 IMAGE:6042296), complete cds PA

EST sequences (10 of 389) [Show all sequences]

AI032618.1 Clone IMAGE:1647099 parathyroid 3' read A
AI140920.1 Clone IMAGE:1690805 mixed 3' read A
AI084688.1 Clone IMAGE:1681526 skin 3' read A
AI167475.1 Clone IMAGE:1661461 mixed 3' read A
BX090024.1 Clone IMAGp998B081826_;_IMAGE:743335 testis A
R25266.1 Clone IMAGE:36456 brain 5' read
AI269208.1 Clone IMAGE:1864655 kidney 3' read
CB134511.1 Clone L5HLK1-25-E06 liver 5' read P
CB114566.1 Clone L8SCK0-2-G04 liver 5' read
CB120606.1 Clone L8SCK0-16-H04 liver 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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