> ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D (ATP6V1D)
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UGID:173502     UniGene Hs.272630     Homo sapiens (human)   ATP6V1D Order cDNA clone, Links
ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D (ATP6V1D)

Human protein-coding gene ATP6V1D. Represented by 661 ESTs from 287 cDNA libraries. Corresponds to reference sequence NM_015994.3. [UniGene 173502 - Hs.272630]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_955418.1 Atp6v1d gene product R. norvegicus 100.0 246
XP_001106329.1 PREDICTED: v-type proton ATPase subunit D isoform 2 M. mulatta 100.0 246
XP_003901993.1 PREDICTED: V-type proton ATPase subunit D P. anubis 100.0 246
XP_001136552.1 PREDICTED: V-type proton ATPase subunit D isoform 1 P. troglodytes 100.0 246
NP_057078.1 ATP6V1D gene product H. sapiens 100.0 246
XP_537484.1 PREDICTED: V-type proton ATPase subunit D isoform 1 C. lupus familiaris 100.0 246
XP_001928349.1 PREDICTED: V-type proton ATPase subunit D S. scrofa 100.0 246
NP_001068609.2 V-type proton ATPase subunit D isoform 1 B. taurus 100.0 246
XP_004002035.1 PREDICTED: V-type proton ATPase subunit D-like O. aries 100.0 246
NP_001075837.1 ATP6V1D gene product O. cuniculus 100.0 246
NP_076210.1 V-type proton ATPase subunit D M. musculus 99.6 246
XP_001499780.1 PREDICTED: v-type proton ATPase subunit D-like E. caballus 99.6 246
NP_001087010.1 ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D X. laevis 96.0 247
NP_001161426.1 V-type proton ATPase subunit D D. rerio 93.2 247
NP_651987.1 vacuolar H[+] ATPase subunit 36-1 D. melanogaster 80.5 245
NP_499094.1 Protein VHA-14 C. elegans 74.7 249
NP_010863.1 Vma8p S. cerevisiae 57.4 255
NP_191432.1 V-type proton ATPase subunit D A. thaliana 57.1 260
XP_962705.2 vacuolar ATP synthase subunit D N. crassa 56.8 228
XP_001695144.1 vacuolar ATP synthase subunit D C. reinhardtii 53.9 232
Other hits (2 of 52) [Show all]SpeciesId(%)Len(aa)
XP_003224909.1 PREDICTED: v-type proton ATPase subunit D-like A. carolinensis 98.8 247
XP_002200522.1 PREDICTED: V-type proton ATPase subunit D T. guttata 98.4 246

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; uncharacterized tissue; placenta; testis; kidney; ovary; eye; lung; prostate; liver; bladder; pituitary gland; skin; intestine; pancreas; blood; embryonic tissue; bone marrow; mammary gland; uterus; bone; pharynx; mouth; thyroid; ascites; lymph node; vascular; esophagus; heart; muscle; trachea; connective tissue; adrenal gland; ear; umbilical cord; cervix; stomach; parathyroid; adipose tissue; spinal cord; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q23-q24.2
UniSTS entry: Chr 14 RH11239 [Map Viewer]
UniSTS entry: Chr 14 A002U41 [Map Viewer]
UniSTS entry: Chr 14 RH48795 [Map Viewer]
UniSTS entry: Chr 14 G60022
UniSTS entry: Chr 1 D11S2442
UniSTS entry: Chr 1 D11S1053
UniSTS entry: Chr 1 D11S3014
UniSTS entry: Chr 1 D11S3076
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

BC025373.1 Homo sapiens ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D, mRNA (cDNA clone MGC:22422 IMAGE:4108457), complete cds PA
AK001155.1 Homo sapiens cDNA FLJ10293 fis, clone NT2RM1000280, highly similar to VACUOLAR ATP SYNTHASE SUBUNIT D (EC 3.6.1.34) P
NM_015994.3 Homo sapiens ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D (ATP6V1D), mRNA PA
AF145316.1 Homo sapiens vacuolar proton pump delta polypeptide (VATD) mRNA, complete cds P
AF100741.1 Homo sapiens vacuolar H-ATPase subunit D mRNA, complete cds PA
AK024101.1 Homo sapiens cDNA FLJ14039 fis, clone HEMBA1005472
AF104629.1 Homo sapiens vacuolar H-ATPase subunit D (VATD) mRNA, complete cds PA
BC001411.2 Homo sapiens ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D, mRNA (cDNA clone MGC:657 IMAGE:3140126), complete cds PA
AF077614.1 Homo sapiens vacuolar ATP synthase subunit D homolog (VATD) mRNA, complete cds P
AK315784.1 Homo sapiens cDNA, FLJ96900, Homo sapiens ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D(ATP6V1D), mRNA P
BC031002.1 Homo sapiens ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D, mRNA (cDNA clone MGC:32729 IMAGE:3686772), complete cds PA

EST sequences (10 of 661) [Show all sequences]

AA985636.1 Clone IMAGE:1593063 kidney 3' read
AA928809.1 Clone IMAGE:1564767 mixed 3' read
AI038924.1 Clone IMAGE:1664226 skin 3' read
R19602.1 Clone IMAGE:33666 brain 5' read
AI073506.1 Clone IMAGE:1565984 mixed 3' read
AI091903.1 Clone IMAGE:1694238 heart 3' read
CB050856.1 Clone IMAGE:3272223 prostate 5' read A
CB050855.1 Clone IMAGE:3272223 prostate 3' read A
AI151245.1 Clone IMAGE:1715828 placenta 3' read
BX113089.1 Clone IMAGp998I04668_;_IMAGE:298827 lung P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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