> Uroplakin 1B (UPK1B)
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UGID:173238     UniGene Hs.271580     Homo sapiens (human)   UPK1B Order cDNA clone, Links
Uroplakin 1B (UPK1B)

Human protein-coding gene UPK1B. Represented by 105 ESTs from 46 cDNA libraries. EST representation biased toward adult. Corresponds to reference sequence NM_006952.3. [UniGene 173238 - Hs.271580]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001108219.1 PREDICTED: uroplakin-1b M. mulatta 100.0 259
XP_003894008.1 PREDICTED: uroplakin-1b isoform 1 P. anubis 100.0 259
XP_526274.3 PREDICTED: uroplakin-1b isoform 2 P. troglodytes 100.0 259
NP_008883.2 UPK1B gene product H. sapiens 100.0 259
NP_849255.2 Upk1b gene product M. musculus 92.3 259
NP_001086351.1 uroplakin 1B X. laevis 74.4 257
Other hits (2 of 14) [Show all]SpeciesId(%)Len(aa)
XP_004002988.1 PREDICTED: uroplakin-1b O. aries 97.7 259
XP_001500833.2 PREDICTED: uroplakin-1b-like E. caballus 97.3 259

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: pharynx; placenta; ovary; kidney; eye; uncharacterized tissue; mouth; brain; cervix; trachea; lung; pancreas; mixed; uterus; bladder; testis; stomach; muscle; esophagus; adipose tissue; tonsil; liver
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3q13.32
UniSTS entry: Chr 1 D16S325
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AB015234.1 Homo sapiens mRNA for uroplakin 1b, complete cds P
AF042331.1 Homo sapiens uroplakin 1B (UPK1B) mRNA, complete cds P
NM_006952.3 Homo sapiens uroplakin 1B (UPK1B), mRNA P
BC063568.1 Homo sapiens uroplakin 1B, mRNA (cDNA clone MGC:74663 IMAGE:3861427), complete cds PA
AB002155.1 Homo sapiens mRNA for human uroplakin Ib, complete cds P
CR457084.1 Homo sapiens full open reading frame cDNA clone RZPDo834H037D for gene UPK1B, uroplakin 1B; complete cds, incl. stopcodon P
AK225868.1 Homo sapiens mRNA for uroplakin 1B variant, clone: FCC124D03 PA
BC012851.2 Homo sapiens uroplakin 1B, mRNA (cDNA clone IMAGE:3858834), partial cds PA
AK313787.1 Homo sapiens cDNA, FLJ94397, highly similar to Homo sapiens uroplakin 1B (UPK1B), mRNA P
AK303924.1 Homo sapiens cDNA FLJ52180 complete cds, highly similar to Uroplakin-1b P
AF082888.1 Homo sapiens uroplakin IB (UPK1B) mRNA, partial cds P

EST sequences (10 of 105) [Show all sequences]

CB066756.1 Clone IMAGE: pancreas 3' read A
CB067020.1 Clone IMAGE: pancreas 5' read P
AI632869.1 Clone IMAGE:2287308 uterus 3' read A
AI689135.1 Clone IMAGE:2277035 uterus 3' read
CB240996.1 Clone UI-CF-FN0-afx-m-07-0-UI lung 3' read PA
AI811548.1 Clone IMAGE:2265418 uterus 3' read PA
CB267782.1 adipose tissue 5' read P
CB321898.1 Clone UI-CF-FN0-aem-m-21-0-UI lung 3' read PA
BX338043.2 Clone CS0DI054YO08 placenta 5' read P
BX387757.2 Clone CS0DI049YL11 placenta 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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