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ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 (ATP5C1)
Human protein-coding gene ATP5C1. Represented by 1337 ESTs from 372 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 173168 - Hs.271135]
SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
| Best Hits and Hits from model organisms | Species | Id(%) | Len(aa) |
|
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PREDICTED: ATP synthase subunit gamma, mitochondrial |
P. troglodytes |
100.0 |
297 |
|
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ATP5C1 gene product |
H. sapiens |
100.0 |
297 |
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PREDICTED: ATP synthase subunit gamma, mitochondrial-like isoform 1 |
P. anubis |
99.7 |
297 |
|
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Atp5c1 gene product |
M. musculus |
94.6 |
297 |
|
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ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 |
X. laevis |
89.5 |
293 |
|
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atp5c1 gene product |
D. rerio |
84.6 |
291 |
|
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ATP synthase-gamma chain, isoform A |
D. melanogaster |
61.6 |
292 |
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Protein Y69A2AR.18, isoform a |
C. elegans |
60.8 |
282 |
| Other hits (2 of 40) [Show all] | Species | Id(%) | Len(aa) |
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PREDICTED: ATP synthase subunit gamma, mitochondrial-like isoform 1 |
M. mulatta |
99.3 |
273 |
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PREDICTED: ATP synthase subunit gamma, mitochondrial isoform 3 |
C. lupus familiaris |
97.6 |
296 |
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
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EST Profile: | Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this] |
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GEO Profiles: |
Experimental gene expression data (Gene Expression Omnibus). |
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cDNA Sources: |
brain; uncharacterized tissue; mixed; pancreas; stomach; lung; bone marrow; muscle; testis; bladder; skin; liver; blood; kidney; placenta; uterus; mammary gland; embryonic tissue; eye; connective tissue; heart; pharynx; thyroid; tonsil; bone; adrenal gland; cervix; ear; salivary gland; intestine; vascular; prostate; mouth; ascites; ovary; umbilical cord; parathyroid; trachea; thymus; spleen; adipose tissue; larynx; lymph node; amniotic fluid; lymph; pituitary gland; pineal gland; esophagus; spinal cord; ganglia; nerve |
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.
mRNA sequences (16)
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NM_005174.2 |
Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 (ATP5C1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA |
PA |
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CR457403.1 |
Homo sapiens full open reading frame cDNA clone RZPDo834C0818D for gene ATP5C1, ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1; complete cds, incl. stopcodon |
P |
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NM_001001973.1 |
Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 (ATP5C1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA |
PA |
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BC000931.3 |
Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, mRNA (cDNA clone MGC:5380 IMAGE:3445817), complete cds |
PA |
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BC000470.2 |
Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, mRNA (cDNA clone MGC:8598 IMAGE:2961142), complete cds |
PA |
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D16563.1 |
Homo sapiens mRNA for ATP synthase gamma-subunit (H-type), complete cds |
P |
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D16562.1 |
Homo sapiens mRNA for ATP synthase gamma-subunit (L-type), complete cds |
P |
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BC013394.2 |
Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, mRNA (cDNA clone MGC:3592 IMAGE:2961142), complete cds |
PA |
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BC016812.1 |
Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, mRNA (cDNA clone MGC:24478 IMAGE:4092259), complete cds |
PA |
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BC020824.1 |
Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, mRNA (cDNA clone MGC:23897 IMAGE:4733791), complete cds |
PA |
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AK292896.1 |
Homo sapiens cDNA FLJ77909 complete cds, highly similar to Homo sapiens ATP synthase, H+ transporting, mitochondrial F1complex, gamma polypeptide 1 (ATP5C1), mRNA |
P |
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BC026049.1 |
Homo sapiens, clone IMAGE:4908447, mRNA, partial cds |
PA |
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AK294061.1 |
Homo sapiens cDNA FLJ59861 complete cds, highly similar to ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14) |
P |
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AK296803.1 |
Homo sapiens cDNA FLJ59921 complete cds, highly similar to ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14) |
P |
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BC013865.1 |
Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, mRNA (cDNA clone IMAGE:3918347) |
PA |
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BC010380.1 |
Homo sapiens cDNA clone IMAGE:4093178, containing frame-shift errors |
PA |
EST sequences (10 of 1337) [Show all sequences]
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AA903263.1 |
Clone IMAGE:1517310 |
uncharacterized tissue |
3' read |
P |
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AA975091.1 |
Clone IMAGE:1555848 |
uncharacterized tissue |
3' read |
P |
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AA977379.1 |
Clone IMAGE:1589042 |
kidney |
3' read |
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AA985060.1 |
Clone IMAGE:1616144 |
brain |
3' read |
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AA985062.1 |
Clone IMAGE:1616148 |
brain |
3' read |
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AA987510.1 |
Clone IMAGE:1604311 |
lung |
3' read |
PA |
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AI018588.1 |
Clone IMAGE:1628395 |
mixed |
3' read |
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AI023994.1 |
Clone IMAGE:1652137 |
mixed |
3' read |
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AI032631.1 |
Clone IMAGE:1647132 |
parathyroid |
3' read |
P |
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AI052801.1 |
Clone IMAGE:1675039 |
mixed |
3' read |
A |
Key to Symbols
P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria
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