> CDK5 regulatory subunit associated protein 2 (CDK5RAP2)
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UGID:172770     UniGene Hs.269560     Homo sapiens (human)   CDK5RAP2 Order cDNA clone, Links
CDK5 regulatory subunit associated protein 2 (CDK5RAP2)

Human protein-coding gene CDK5RAP2. Represented by 394 ESTs from 195 cDNA libraries. Corresponds to 8 reference sequences (different isoforms). [UniGene 172770 - Hs.269560]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_060719.4 CDK5RAP2 gene product H. sapiens 100.0 1892
NP_666102.2 Cdk5rap2 gene product M. musculus 78.5 1821
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
NP_001035901.1 CDK5RAP2 gene product P. troglodytes 99.3 1892
XP_002800046.1 PREDICTED: CDK5 regulatory subunit-associated protein 2-like M. mulatta 95.9 1861

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; lung; testis; embryonic tissue; mixed; eye; kidney; vascular; intestine; muscle; connective tissue; liver; blood; mammary gland; adipose tissue; prostate; ovary; lymph; thyroid; bone marrow; placenta; pancreas; cervix; ear; trachea; uterus; skin; bone; pharynx; thymus; stomach; lymph node; parathyroid; heart; mouth; ascites; nerve; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q33.2
UniSTS entry: Chr 9 WI-15097 [Map Viewer]
UniSTS entry: Chr 9 AB056817
UniSTS entry: Chr 9 G20308
UniSTS entry: Chr 9 A005L20
UniSTS entry: Chr 9 RH104241
UniSTS entry: Chr 6 SGC36937 [Map Viewer]
UniSTS entry: Chr 2 RH69870
UniSTS entry: Chr 9 WI-11542 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (34)

AF448860.1 Homo sapiens hypothetical protein mRNA, complete cds P
BX537759.1 Homo sapiens mRNA; cDNA DKFZp686O0188 (from clone DKFZp686O0188); complete cds PA
BX537708.1 Homo sapiens mRNA; cDNA DKFZp686M1993 (from clone DKFZp686M1993); complete cds PA
BX537421.1 Homo sapiens mRNA; cDNA DKFZp686E2146 (from clone DKFZp686E2146); complete cds PA
BX640896.1 Homo sapiens mRNA; cDNA DKFZp686E2242 (from clone DKFZp686E2242) PA
AK122913.1 Homo sapiens cDNA FLJ16590 fis, clone TESTI4001604, highly similar to CDK5 regulatory subunit-associated protein 2 P
AK001729.1 Homo sapiens cDNA FLJ10867 fis, clone NT2RP4001634 P
AL133161.1 Homo sapiens mRNA; cDNA DKFZp434K0115 (from clone DKFZp434K0115); partial cds PA
NM_018249.5 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 1, mRNA P
NM_001011649.2 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 2, mRNA P
CR936717.1 Homo sapiens mRNA; cDNA DKFZp686B1070 (from clone DKFZp686B1070) P
CR936622.1 Homo sapiens mRNA; cDNA DKFZp686D1070 (from clone DKFZp686D1070) P
AB046853.2 Homo sapiens mRNA for KIAA1633 protein, partial cds P
AK025867.1 Homo sapiens cDNA: FLJ22214 fis, clone HRC01534 PA
BC004526.2 Homo sapiens CDK5 regulatory subunit associated protein 2, mRNA (cDNA clone IMAGE:3537925), complete cds PA
AK027636.1 Homo sapiens cDNA FLJ14730 fis, clone NT2RP3001931, weakly similar to Rattus norvegicus clone C48 CDK5 activator-binding protein mRNA P
BC146782.1 Homo sapiens CDK5 regulatory subunit associated protein 2, mRNA (cDNA clone MGC:166867 IMAGE:9007237), complete cds PA
AL833481.1 Homo sapiens mRNA; cDNA DKFZp686D0129 (from clone DKFZp686D0129) PA
BC019577.1 Homo sapiens CDK5 regulatory subunit associated protein 2, mRNA (cDNA clone IMAGE:4937907), partial cds PA
AF087969.1 Homo sapiens full length insert cDNA clone YU73B11 PA
BC143764.1 Homo sapiens cDNA clone IMAGE:9052278, with apparent retained intron PA
BC143762.1 Homo sapiens CDK5 regulatory subunit associated protein 2, mRNA (cDNA clone MGC:177293 IMAGE:9052276), complete cds PA
BC143734.1 Homo sapiens cDNA clone IMAGE:9052248, containing frame-shift errors PA
BC143760.1 Homo sapiens cDNA clone IMAGE:9052274, with apparent retained intron PA
BC143753.1 Homo sapiens cDNA clone IMAGE:9052267, containing frame-shift errors PA
BC143755.1 Homo sapiens cDNA clone IMAGE:9052269, with apparent retained intron PA
BC143732.1 Homo sapiens cDNA clone IMAGE:9052246, containing frame-shift errors PA
BC136275.1 Homo sapiens CDK5 regulatory subunit associated protein 2, mRNA (cDNA clone MGC:167885 IMAGE:9020262), complete cds PA
NR_073558.1 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 8, non-coding RNA
NR_073556.1 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 6, non-coding RNA
NR_073554.1 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 4, non-coding RNA
NR_073557.1 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 7, non-coding RNA
NR_073555.1 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 5, non-coding RNA
NM_001272039.1 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 3, mRNA

EST sequences (10 of 394) [Show all sequences]

AA962117.1 Clone IMAGE:1600277 uncharacterized tissue 3' read A
AI032741.1 Clone IMAGE:1656222 mixed 3' read
AI033598.1 Clone IMAGE:1656199 mixed 3' read
AI074999.1 Clone IMAGE:1594310 intestine 3' read PA
AI090658.1 Clone IMAGE:1691617 heart 3' read
AI131161.1 Clone IMAGE:1709664 heart 3' read PA
BX093750.1 Clone IMAGp998O07730_;_IMAGE:322782 parathyroid P
BX092427.1 Clone IMAGp998D041014_;_IMAGE:431571 mixed A
BX092854.1 Clone IMAGp998L0685_;_IMAGE:110741 mixed A
AI189187.1 Clone IMAGE:1722357 uterus 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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