NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:172770     UniGene Hs.269560     Homo sapiens (human)   CDK5RAP2
CDK5 regulatory subunit associated protein 2 (CDK5RAP2)

Human protein-coding gene CDK5RAP2. Represented by 394 ESTs from 195 cDNA libraries. Corresponds to 8 reference sequences (different isoforms). [UniGene 172770 - Hs.269560]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_060719.4 CDK5RAP2 gene product H. sapiens 100.0 1892
NP_666102.2 Cdk5rap2 gene product M. musculus 78.5 1821
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
NP_001035901.1 CDK5RAP2 gene product P. troglodytes 99.3 1892
XP_002800046.1 PREDICTED: CDK5 regulatory subunit-associated protein 2-like M. mulatta 95.9 1861

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; lung; testis; embryonic tissue; mixed; eye; kidney; vascular; intestine; muscle; connective tissue; liver; blood; mammary gland; adipose tissue; prostate; ovary; lymph; thyroid; bone marrow; placenta; pancreas; cervix; ear; trachea; uterus; skin; bone; pharynx; thymus; stomach; lymph node; parathyroid; heart; mouth; ascites; nerve; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q33.2
UniSTS entry: Chr 9 WI-15097 [Map Viewer]
UniSTS entry: Chr 9 AB056817
UniSTS entry: Chr 9 G20308
UniSTS entry: Chr 9 A005L20
UniSTS entry: Chr 9 RH104241
UniSTS entry: Chr 6 SGC36937 [Map Viewer]
UniSTS entry: Chr 2 RH69870
UniSTS entry: Chr 9 WI-11542 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (34)

AF448860.1 Homo sapiens hypothetical protein mRNA, complete cds P
BX537759.1 Homo sapiens mRNA; cDNA DKFZp686O0188 (from clone DKFZp686O0188); complete cds PA
BX537708.1 Homo sapiens mRNA; cDNA DKFZp686M1993 (from clone DKFZp686M1993); complete cds PA
BX537421.1 Homo sapiens mRNA; cDNA DKFZp686E2146 (from clone DKFZp686E2146); complete cds PA
BX640896.1 Homo sapiens mRNA; cDNA DKFZp686E2242 (from clone DKFZp686E2242) PA
AK122913.1 Homo sapiens cDNA FLJ16590 fis, clone TESTI4001604, highly similar to CDK5 regulatory subunit-associated protein 2 P
AK001729.1 Homo sapiens cDNA FLJ10867 fis, clone NT2RP4001634 P
AL133161.1 Homo sapiens mRNA; cDNA DKFZp434K0115 (from clone DKFZp434K0115); partial cds PA
NM_018249.5 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 1, mRNA P
NM_001011649.2 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 2, mRNA P
CR936717.1 Homo sapiens mRNA; cDNA DKFZp686B1070 (from clone DKFZp686B1070) P
CR936622.1 Homo sapiens mRNA; cDNA DKFZp686D1070 (from clone DKFZp686D1070) P
AB046853.2 Homo sapiens mRNA for KIAA1633 protein, partial cds P
AK025867.1 Homo sapiens cDNA: FLJ22214 fis, clone HRC01534 PA
BC004526.2 Homo sapiens CDK5 regulatory subunit associated protein 2, mRNA (cDNA clone IMAGE:3537925), complete cds PA
AK027636.1 Homo sapiens cDNA FLJ14730 fis, clone NT2RP3001931, weakly similar to Rattus norvegicus clone C48 CDK5 activator-binding protein mRNA P
BC146782.1 Homo sapiens CDK5 regulatory subunit associated protein 2, mRNA (cDNA clone MGC:166867 IMAGE:9007237), complete cds PA
AL833481.1 Homo sapiens mRNA; cDNA DKFZp686D0129 (from clone DKFZp686D0129) PA
BC019577.1 Homo sapiens CDK5 regulatory subunit associated protein 2, mRNA (cDNA clone IMAGE:4937907), partial cds PA
AF087969.1 Homo sapiens full length insert cDNA clone YU73B11 PA
BC143764.1 Homo sapiens cDNA clone IMAGE:9052278, with apparent retained intron PA
BC143762.1 Homo sapiens CDK5 regulatory subunit associated protein 2, mRNA (cDNA clone MGC:177293 IMAGE:9052276), complete cds PA
BC143734.1 Homo sapiens cDNA clone IMAGE:9052248, containing frame-shift errors PA
BC143760.1 Homo sapiens cDNA clone IMAGE:9052274, with apparent retained intron PA
BC143753.1 Homo sapiens cDNA clone IMAGE:9052267, containing frame-shift errors PA
BC143755.1 Homo sapiens cDNA clone IMAGE:9052269, with apparent retained intron PA
BC143732.1 Homo sapiens cDNA clone IMAGE:9052246, containing frame-shift errors PA
BC136275.1 Homo sapiens CDK5 regulatory subunit associated protein 2, mRNA (cDNA clone MGC:167885 IMAGE:9020262), complete cds PA
NR_073558.1 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 8, non-coding RNA
NR_073556.1 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 6, non-coding RNA
NR_073554.1 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 4, non-coding RNA
NR_073557.1 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 7, non-coding RNA
NR_073555.1 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 5, non-coding RNA
NM_001272039.1 Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 3, mRNA

EST sequences (10 of 394) [Show all sequences]

AA962117.1 Clone IMAGE:1600277 uncharacterized tissue 3' read A
AI032741.1 Clone IMAGE:1656222 mixed 3' read
AI033598.1 Clone IMAGE:1656199 mixed 3' read
AI074999.1 Clone IMAGE:1594310 intestine 3' read PA
AI090658.1 Clone IMAGE:1691617 heart 3' read
AI131161.1 Clone IMAGE:1709664 heart 3' read PA
BX093750.1 Clone IMAGp998O07730_;_IMAGE:322782 parathyroid P
BX092427.1 Clone IMAGp998D041014_;_IMAGE:431571 mixed A
BX092854.1 Clone IMAGp998L0685_;_IMAGE:110741 mixed A
AI189187.1 Clone IMAGE:1722357 uterus 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help