> Tripartite motif containing 58 (TRIM58)
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UGID:172646     UniGene Hs.269151     Homo sapiens (human)   TRIM58 Order cDNA clone, Links
Tripartite motif containing 58 (TRIM58)

Human protein-coding gene TRIM58. Represented by 63 ESTs from 34 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 172646 - Hs.269151]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_056246.3 TRIM58 gene product H. sapiens 100.0 485
NP_001034136.1 Trim58 gene product M. musculus 82.2 483
XP_683612.5 PREDICTED: nuclear factor 7, ovary D. rerio 47.9 192
NP_001088240.1 uncharacterized protein LOC495071 X. laevis 46.3 164
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
XP_524544.3 PREDICTED: tripartite motif-containing protein 58 P. troglodytes 98.6 485
XP_003893695.1 PREDICTED: tripartite motif-containing protein 58 P. anubis 95.5 485

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; mammary gland; spinal cord; bone marrow; skin; uncharacterized tissue; placenta; uterus; salivary gland; eye; muscle; nerve; brain; lung; kidney; blood; prostate; larynx; lymph node; testis; heart
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q44
UniSTS entry: Chr 1 SHGC-34859 [Map Viewer]
UniSTS entry: Chr 1 RH78729 [Map Viewer]
UniSTS entry: Chr 1 RH17518 [Map Viewer]
UniSTS entry: Chr 1 D11S3114
UniSTS entry: Chr 1 D10S2448
UniSTS entry: Chr 1 SHGC-76650 [Map Viewer]
UniSTS entry: Chr 1 BIA2_4445
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

BX537432.1 Homo sapiens mRNA; cDNA DKFZp686N09198 (from clone DKFZp686N09198); complete cds PA
BC074748.2 Homo sapiens tripartite motif-containing 58, mRNA (cDNA clone IMAGE:30915208), partial cds P
NM_001001957.2 Homo sapiens olfactory receptor, family 2, subfamily W, member 3 (OR2W3), mRNA P
BC146848.1 Homo sapiens olfactory receptor, family 2, subfamily W, member 3, mRNA (cDNA clone MGC:181951 IMAGE:9056776), complete cds P
AF327057.1 Homo sapiens BIA2 protein mRNA, complete cds PA
AK096188.1 Homo sapiens cDNA FLJ38869 fis, clone MESAN2013283, weakly similar to 52 KDA RO PROTEIN P
NM_015431.3 Homo sapiens tripartite motif containing 58 (TRIM58), mRNA P

EST sequences (10 of 63) [Show all sequences]

BX110624.1 Clone IMAGp998N1092_;_IMAGE:113481 mixed
BX091434.1 Clone IMAGp998J05208_;_IMAGE:141412 placenta A
BX093298.1 Clone IMAGp998K11526_;_IMAGE:244354 mixed
AI217090.1 Clone IMAGE:1732290 heart 3' read A
BX509111.1 Clone DKFZp686C20280 muscle 5' read P
AW189204.1 Clone IMAGE:2675090 uterus 3' read A
BX644877.1 Clone DKFZp781D1536 uncharacterized tissue 5' read P
CF993737.1 Clone IMAGE:30706072 placenta 5' read P
CK002540.1 Clone IMAGE:30716931 spinal cord 5' read P
R68859.1 Clone IMAGE:141412 placenta 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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