> Family with sequence similarity 122C (FAM122C)
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UGID:172639     UniGene Hs.269127     Homo sapiens (human)   FAM122C Order cDNA clone, Links
Family with sequence similarity 122C (FAM122C)

Human protein-coding gene FAM122C. Represented by 77 ESTs from 44 cDNA libraries. Corresponds to 7 reference sequences (different isoforms). [UniGene 172639 - Hs.269127]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001164250.1 FAM122C gene product H. sapiens 100.0 194
NP_080796.1 Fam122a gene product M. musculus 57.5 179
NP_001085566.1 family with sequence similarity 122A X. laevis 54.1 172
NP_001003466.1 fam122b gene product D. rerio 52.0 179
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_003317753.2 PREDICTED: protein FAM122A-like P. troglodytes 97.8 181
XP_003918356.1 PREDICTED: protein FAM122A-like P. anubis 90.5 306

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; mixed; thyroid; thymus; bone; blood; brain; prostate; stomach; lung; skin; liver; uncharacterized tissue; cervix; vascular; adrenal gland; connective tissue; spleen; parathyroid; ovary; eye; ascites; muscle
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xq26.3
UniSTS entry: Chr 1 GDB:631802
UniSTS entry: STS-N21327
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

AK130840.1 Homo sapiens cDNA FLJ27330 fis, clone TMS08444 P
BC063491.1 Homo sapiens family with sequence similarity 122C, mRNA (cDNA clone MGC:74677 IMAGE:5229041), complete cds PA
BC065225.1 Homo sapiens family with sequence similarity 122C, mRNA (cDNA clone MGC:74678 IMAGE:5724414), complete cds A
BC017868.1 Homo sapiens family with sequence similarity 122C, mRNA (cDNA clone MGC:22643 IMAGE:4699951), complete cds PA
AK310079.1 Homo sapiens cDNA, FLJ17121
AK307219.1 Homo sapiens cDNA, FLJ97167 P
NM_138819.3 Homo sapiens family with sequence similarity 122C (FAM122C), transcript variant 2, mRNA PA
AK090611.1 Homo sapiens cDNA FLJ33292 fis, clone BNGH42000130, weakly similar to Homo sapiens beta glucuronidase isoform PA
AF088001.1 Homo sapiens full length insert cDNA clone YX49B11 A
NM_001170784.1 Homo sapiens family with sequence similarity 122C (FAM122C), transcript variant 7, mRNA A
NM_001170783.1 Homo sapiens family with sequence similarity 122C (FAM122C), transcript variant 6, mRNA A
NM_001170782.1 Homo sapiens family with sequence similarity 122C (FAM122C), transcript variant 5, mRNA A
NM_001170781.1 Homo sapiens family with sequence similarity 122C (FAM122C), transcript variant 4, mRNA PA
NM_001170780.1 Homo sapiens family with sequence similarity 122C (FAM122C), transcript variant 3, mRNA PA
NM_001170779.1 Homo sapiens family with sequence similarity 122C (FAM122C), transcript variant 1, mRNA PA
BC016784.1 Homo sapiens hypothetical protein BC017868, mRNA (cDNA clone IMAGE:4072765), partial cds A

EST sequences (10 of 77) [Show all sequences]

AI023601.1 Clone IMAGE:1643611 testis 3' read
BX105391.1 Clone IMAGp998I22580_;_IMAGE:265053 skin A
BX118023.1 Clone IMAGp998I204170_;_IMAGE:1643611 testis P
CB134620.1 Clone L14ChoiCK0-13-H12 liver 5' read P
AI201761.1 Clone IMAGE:1944234 prostate 3' read P
AI459248.1 Clone IMAGE:2150701 lung 3' read
AI610994.1 Clone IMAGE:2252404 prostate 3' read A
AI597723.1 Clone IMAGE:2254623 prostate 3' read PA
AI653705.1 Clone IMAGE:2307753 uncharacterized tissue 3' read
AI701427.1 Clone IMAGE:2342553 lung 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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