> Translation machinery associated 16 homolog (S. cerevisiae) (TMA16)
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UGID:172362     UniGene Hs.267446     Homo sapiens (human)   TMA16 Order cDNA clone, Links
Translation machinery associated 16 homolog (S. cerevisiae) (TMA16)

Human protein-coding gene TMA16. Represented by 179 ESTs from 98 cDNA libraries. Corresponds to reference sequence NM_018352.2. [UniGene 172362 - Hs.267446]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001138474.2 PREDICTED: translation machinery-associated protein 16 P. troglodytes 100.0 202
NP_060822.2 TMA16 gene product H. sapiens 100.0 202
NP_079741.1 Tma16 gene product M. musculus 79.6 216
NP_001089532.1 translation machinery-associated protein 16 X. laevis 71.8 195
NP_001171216.1 tma16 gene product D. rerio 70.1 193
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_003899381.1 PREDICTED: translation machinery-associated protein 16 P. anubis 96.5 202
XP_001104354.2 PREDICTED: UPF0534 protein C4orf43-like M. mulatta 93.5 213

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; uncharacterized tissue; brain; skin; placenta; mixed; uterus; liver; embryonic tissue; lung; pancreas; bone marrow; kidney; bone; lymph node; bladder; vascular; prostate; salivary gland; connective tissue; intestine; mammary gland; blood; eye; muscle; heart; pineal gland; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q32.2
UniSTS entry: Chr 4 RH93364
UniSTS entry: Chr 4 SHGC-50341
UniSTS entry: Chr 4 RH101955
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AK002046.1 Homo sapiens cDNA FLJ11184 fis, clone PLACE1007507 P
NM_018352.2 Homo sapiens translation machinery associated 16 homolog (S. cerevisiae) (TMA16), mRNA P
BC011842.2 Homo sapiens chromosome 4 open reading frame 43, mRNA (cDNA clone MGC:19960 IMAGE:4110177), complete cds PA
BC017418.1 Homo sapiens chromosome 4 open reading frame 43, mRNA (cDNA clone IMAGE:4672457), containing frame-shift errors PA
BC005204.1 Homo sapiens chromosome 4 open reading frame 43, mRNA (cDNA clone IMAGE:3829877), containing frame-shift errors PA
AK298235.1 Homo sapiens cDNA FLJ52950 complete cds P

EST sequences (10 of 179) [Show all sequences]

AA976852.1 Clone IMAGE:1558742 lung 3' read A
AA903385.1 Clone IMAGE:1518522 uncharacterized tissue 3' read PA
AI080037.1 Clone IMAGE:1678822 skin 3' read A
AI122657.1 Clone IMAGE:1693865 heart 3' read PA
BX098815.1 Clone IMAGp998L211011_;_IMAGE:430628 mixed P
CB160065.1 Clone L18POOL1n1-47-C09 liver 5' read PA
AA909754.1 Clone IMAGE:1521040 lung 3' read A
AI285136.1 Clone IMAGE:1873035 intestine 3' read A
AA824312.1 Clone 1391807 testis 3' read A
AI367124.1 Clone IMAGE:1873982 intestine 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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