> Histone deacetylase 10 (HDAC10)
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UGID:135250     UniGene Hs.26593     Homo sapiens (human)   HDAC10 Order cDNA clone, Links
Histone deacetylase 10 (HDAC10)

Human protein-coding gene HDAC10. Represented by 299 ESTs from 113 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 135250 - Hs.26593]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_114408.3 HDAC10 gene product H. sapiens 100.0 668
XP_515218.2 PREDICTED: histone deacetylase 10 isoform 2 P. troglodytes 99.5 668
NP_954668.2 Hdac10 gene product M. musculus 83.5 660
NP_001089352.1 histone deacetylase 10 X. laevis 64.4 663
NP_956069.1 hdac10 gene product D. rerio 60.4 669
XP_001697497.1 histone deacetylase C. reinhardtii 53.4 222
NP_001162760.1 HDAC6, isoform D D. melanogaster 53.1 697
NP_566612.1 histone deacetylase 15 A. thaliana 49.8 291
XP_956974.2 hypothetical protein NCU01525 N. crassa 45.8 212
NP_014377.1 Hda1p S. cerevisiae 45.6 204
NP_496910.1 Protein HDA-10 C. elegans 45.2 197
Other hits (2 of 54) [Show all]SpeciesId(%)Len(aa)
XP_001112365.1 PREDICTED: histone deacetylase 10-like isoform 3 M. mulatta 97.6 670
XP_003905791.1 PREDICTED: histone deacetylase 10 isoform 1 P. anubis 97.5 670

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; brain; mixed; liver; blood; ovary; prostate; spleen; heart; bladder; skin; ganglia; pancreas; vascular; stomach; lymph; lymph node; lung; cervix; testis; embryonic tissue; kidney; intestine; placenta; thymus; eye; mammary gland; uterus; bone marrow; adrenal gland; pineal gland; esophagus; bone; salivary gland; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q13.31
UniSTS entry: Chr 22 WI-14130 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

CR456465.1 Homo sapiens dJ402G11.7 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.dJ402G11.7.V5) P
BC094734.1 Homo sapiens histone deacetylase 10, mRNA (cDNA clone IMAGE:4824678) PA
AL512711.1 Homo sapiens mRNA; cDNA DKFZp761B039 (from clone DKFZp761B039) PA
BC125083.1 Homo sapiens histone deacetylase 10, mRNA (cDNA clone MGC:149722 IMAGE:40117772), complete cds P
BC125082.1 Homo sapiens histone deacetylase 10, mRNA (cDNA clone IMAGE:40117771), complete cds P
NM_032019.5 Homo sapiens histone deacetylase 10 (HDAC10), transcript variant 1, mRNA PA
AF407273.1 Homo sapiens histone deacetylase 10 isoform beta (HDAC10) mRNA, complete cds P
AF407272.1 Homo sapiens histone deacetylase 10 isoform alpha (HDAC10) mRNA, complete cds P
AF393962.1 Homo sapiens histone deacetylase 10 isoform b mRNA, complete cds P
AF426160.1 Homo sapiens histone deacetylase 10 (HDAC10) mRNA, complete cds P
BC032423.1 Homo sapiens histone deacetylase 10, mRNA (cDNA clone IMAGE:5220049), with apparent retained intron P
BC032049.1 Homo sapiens histone deacetylase 10, mRNA (cDNA clone IMAGE:4778301) P
NM_001159286.1 Homo sapiens histone deacetylase 10 (HDAC10), transcript variant 2, mRNA PA

EST sequences (10 of 299) [Show all sequences]

AA972528.1 Clone IMAGE:1435475 intestine 3' read P
AA993481.1 Clone IMAGE:1621578 testis 3' read P
AA999733.1 Clone IMAGE:1609104 mammary gland 3' read P
AI146781.1 Clone IMAGE:1706726 heart 3' read P
BX115581.1 Clone IMAGp998E141850_;_IMAGE:752629 mixed P
AI205079.1 Clone IMAGE:1684651 brain 3' read
AI307140.1 Clone IMAGE:1879555 mixed 3' read P
AI339683.1 Clone IMAGE:1874094 intestine 3' read P
AI378064.1 Clone IMAGE:2072397 uncharacterized tissue 3' read P
AI433094.1 Clone IMAGE:2120833 lymph node 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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