|
Mannosidase, alpha, class 2C, member 1 (MAN2C1)
Human protein-coding gene MAN2C1. Represented by 611 ESTs from 234 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 135178 - Hs.26232]
SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
| Best Hits and Hits from model organisms | Species | Id(%) | Len(aa) |
|
|
MAN2C1 gene product |
H. sapiens |
100.0 |
1056 |
|
|
PREDICTED: LOW QUALITY PROTEIN: alpha-mannosidase 2C1 |
P. troglodytes |
100.0 |
966 |
|
|
Man2c1 gene product |
M. musculus |
93.7 |
1038 |
|
|
mannosidase, alpha, class 2C, member 1 |
X. laevis |
74.7 |
1041 |
|
|
PREDICTED: alpha-mannosidase 2C1-like |
D. rerio |
71.9 |
973 |
|
|
hypothetical protein CHLREDRAFT_144252 |
C. reinhardtii |
55.0 |
1042 |
|
|
Ams1p |
S. cerevisiae |
52.9 |
678 |
|
|
hypothetical protein NCU07404 |
N. crassa |
51.8 |
762 |
| Other hits (2 of 32) [Show all] | Species | Id(%) | Len(aa) |
|
|
PREDICTED: alpha-mannosidase 2C1 isoform 2 |
P. anubis |
98.8 |
1056 |
|
|
PREDICTED: alpha-mannosidase 2C1 isoform 2 |
M. mulatta |
98.5 |
1036 |
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
|
EST Profile: | Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this] |
|
GEO Profiles: |
Experimental gene expression data (Gene Expression Omnibus). |
|
cDNA Sources: |
brain; testis; uncharacterized tissue; thymus; lung; bladder; blood; placenta; embryonic tissue; thyroid; heart; uterus; mixed; trachea; spleen; ovary; adrenal gland; connective tissue; liver; mouth; eye; pancreas; mammary gland; kidney; prostate; intestine; epididymis; bone; lymph; skin; muscle; larynx; umbilical cord; ascites; amniotic fluid; lymph node; stomach; esophagus; salivary gland; nerve; ganglia; cervix; adipose tissue; vascular |
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.
mRNA sequences (15)
|
BC050550.1 |
Homo sapiens mannosidase, alpha, class 2C, member 1, mRNA (cDNA clone MGC:57644 IMAGE:5529534), complete cds |
PA |
|
BX647111.1 |
Homo sapiens mRNA; cDNA DKFZp686K24244 (from clone DKFZp686K24244) |
PA |
|
NM_006715.3 |
Homo sapiens mannosidase, alpha, class 2C, member 1 (MAN2C1), transcript variant 1, mRNA |
PA |
|
AL136876.1 |
Homo sapiens mRNA; cDNA DKFZp434D175 (from clone DKFZp434D175) |
PA |
|
BC080191.1 |
Homo sapiens mannosidase, alpha, class 2C, member 1, mRNA (cDNA clone MGC:87979 IMAGE:6149811), complete cds |
PA |
|
U37248.1 |
Homo sapiens alpha-mannosidase (6A8) mRNA, complete cds |
PA |
|
AK225145.1 |
Homo sapiens mRNA for mannosidase, alpha, class 2C, member 1 variant, clone: CBL07522 |
PA |
|
AK311065.1 |
Homo sapiens cDNA, FLJ18107 |
P |
|
AK295265.1 |
Homo sapiens cDNA FLJ59120 complete cds, moderately similar to Alpha-mannosidase 2C1 (EC 3.2.1.24) |
P |
|
AK294892.1 |
Homo sapiens cDNA FLJ57925 complete cds, highly similar to Alpha-mannosidase 2C1 (EC 3.2.1.24) |
P |
|
NM_001256495.1 |
Homo sapiens mannosidase, alpha, class 2C, member 1 (MAN2C1), transcript variant 3, mRNA |
PA |
|
NM_001256496.1 |
Homo sapiens mannosidase, alpha, class 2C, member 1 (MAN2C1), transcript variant 4, mRNA |
PA |
|
NM_001256494.1 |
Homo sapiens mannosidase, alpha, class 2C, member 1 (MAN2C1), transcript variant 2, mRNA |
PA |
|
BC038594.1 |
Homo sapiens mannosidase, alpha, class 2C, member 1, mRNA (cDNA clone IMAGE:5527998), containing frame-shift errors |
PA |
|
AF044414.2 |
Homo sapiens alpha mannosidase 6A8B (6a8b) mRNA, complete cds |
PA |
EST sequences (10 of 611) [Show all sequences]
|
AA836785.1 |
Clone IMAGE:1422614 |
kidney |
|
|
|
AA975825.1 |
Clone IMAGE:1558261 |
lung |
3' read |
A |
|
AI080978.1 |
Clone IMAGE:1652909 |
mixed |
3' read |
A |
|
BX100021.1 |
Clone IMAGp998D02243_;_IMAGE:154705 |
mammary gland |
|
P |
|
BX115346.1 |
Clone IMAGp998H125554_;_IMAGE:2244539 |
uncharacterized tissue |
|
|
|
BX111851.1 |
Clone IMAGp998H111963_;_IMAGE:796090 |
embryonic tissue |
|
|
|
AI206884.1 |
Clone IMAGE:1942245 |
uncharacterized tissue |
3' read |
|
|
AI271536.1 |
Clone IMAGE:1857984 |
mixed |
3' read |
PA |
|
CB153543.1 |
Clone B1T694954-29-G04 |
brain |
5' read |
|
|
CB150319.1 |
Clone C1SNU17s1-2-E07 |
cervix |
5' read |
P |
Key to Symbols
P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria
|
|
