> Chromosome 1 open reading frame 52 (C1orf52)
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UGID:135175     UniGene Hs.26226     Homo sapiens (human)   C1orf52 Order cDNA clone, Links
Chromosome 1 open reading frame 52 (C1orf52)

Human protein-coding gene C1orf52. Represented by 70 ESTs from 49 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 135175 - Hs.26226]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001141272.1 PREDICTED: UPF0690 protein C1orf52 homolog isoform 2 P. troglodytes 100.0 181
NP_932343.1 C1orf52 gene product H. sapiens 100.0 181
NP_079831.1 2410004B18Rik gene product M. musculus 88.9 179
NP_001089905.1 UPF0690 protein C1orf52 homolog B X. laevis 67.3 167
NP_956836.1 zgc:65873 gene product D. rerio 56.3 190
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
XP_001108738.1 PREDICTED: UPF0690 protein C1orf52-like isoform 2 M. mulatta 99.5 181
XP_003892183.1 PREDICTED: UPF0690 protein C1orf52 homolog P. anubis 99.5 181

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; heart; uterus; mixed; embryonic tissue; mammary gland; kidney; muscle; skin; testis; thymus; prostate; placenta; pancreas; lung; eye; connective tissue; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p22.3
UniSTS entry: Chr 1 SHGC-75084 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BC051692.1 Homo sapiens cDNA clone IMAGE:5287350 A
AK126929.1 Homo sapiens cDNA FLJ44982 fis, clone BRAWH3003975 P
NM_198077.3 Homo sapiens chromosome 1 open reading frame 52 (C1orf52), transcript variant 1, mRNA PA
AY486332.1 Homo sapiens BCL10-associated protein variant 2 (BAG) mRNA, complete cds, alternatively spliced P
AY486331.1 Homo sapiens BCL10-associated protein variant 1 (BAG) mRNA, complete cds, alternatively spliced P
AK024939.1 Homo sapiens cDNA: FLJ21286 fis, clone COL01915 A
AF387612.1 Homo sapiens gm117 form B mRNA, partial cds, alternatively spliced P
AF387611.1 Homo sapiens gm117 form A mRNA, partial cds, alternatively spliced P
BC029538.1 Homo sapiens chromosome 1 open reading frame 52, mRNA (cDNA clone MGC:33961 IMAGE:5303467), complete cds PA
NR_024113.1 Homo sapiens chromosome 1 open reading frame 52 (C1orf52), transcript variant 2, non-coding RNA PA

EST sequences (10 of 70) [Show all sequences]

AA983378.1 Clone IMAGE:1592756 kidney 3' read A
AI038166.1 Clone IMAGE:1660062 embryonic tissue 3' read
AA947723.1 Clone IMAGE:1586468 uncharacterized tissue 3' read A
AI127724.1 Clone IMAGE:1710769 uterus 3' read A
AI139388.1 Clone IMAGE:1710679 uterus 3' read A
AI160882.1 Clone IMAGE:1705023 heart 3' read A
BX112822.1 Clone IMAGp998B02243_;_IMAGE:154657 mammary gland
BX118798.1 Clone IMAGp998D17150_;_IMAGE:31034 brain A
AA905798.1 Clone IMAGE:1505083 mixed 3' read A
AI291500.1 Clone IMAGE:1894945 placenta 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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