SWI5 recombination repair homolog (yeast) (SWI5)

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UGID:171916 UniGene Hs.259594 Homo sapiens (human) SWI5

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SWI5 recombination repair homolog (yeast) (SWI5)

Human protein-coding gene SWI5. Represented by 125 ESTs from 76 cDNA libraries. Corresponds to reference sequence NM_001040011.1. [UniGene 171916 - Hs.259594]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_001035100.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	SWI5 gene product	H. sapiens	100.0	234
XP_003951596.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: DNA repair protein SWI5 homolog	P. troglodytes	100.0	233
Other hits (2 of 4) [Show all]		Species	Id(%)	Len(aa)
XP_001093082.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein C9orf119-like	M. mulatta	97.3	147
XP_003919645.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: DNA repair protein SWI5 homolog	P. anubis	95.9	168

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	mixed; brain; eye; bone marrow; pharynx; skin; mammary gland; kidney; heart; uncharacterized tissue; blood; testis; lung; pancreas; liver; ovary; prostate; embryonic tissue; uterus; adrenal gland; bladder; salivary gland; cervix; ascites; placenta; thyroid; bone; lymph node; adipose tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	9
	Map position:	9q34.11

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

DQ414820.1	Homo sapiens HBV DNAPTP1-transactivated protein A mRNA, complete cds	P
NM_001040011.1	Homo sapiens SWI5 recombination repair homolog (yeast) (SWI5), mRNA	PA
AK311408.1	Homo sapiens cDNA, FLJ18450	P
BC029911.1	Homo sapiens chromosome 9 open reading frame 119, mRNA (cDNA clone IMAGE:5168627), partial cds	PA

EST sequences (10 of 125) [Show all sequences]

AA969726.1	Clone IMAGE:1579244	mixed	3' read	A
AI073907.1	Clone IMAGE:1632283	mammary gland	3' read	A
AI127398.1	Clone IMAGE:1705508	heart	3' read	A
BX094478.1	Clone IMAGp998G131935_;_IMAGE:785316	embryonic tissue		P
AI184238.1	Clone IMAGE:1714284	placenta	3' read	A
AI208449.1	Clone IMAGE:1837258	testis	3' read	A
AI219682.1	Clone IMAGE:1841694	mixed	3' read	A
AI222372.1	Clone IMAGE:1843182	mixed	3' read	A
AI223305.1	Clone IMAGE:1840588	mixed	3' read	A
AI262198.1	Clone IMAGE:1868443	kidney	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria